Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-103P-201ENST00000363686 107 ntBASIC-2.82□□□□□ -2.86
IFT140Q96RY7 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.82□□□□□ -2.86
IFT140Q96RY7 SNORD115-17-201ENST00000364612 82 ntBASIC-2.82□□□□□ -2.86
IFT140Q96RY7 U7.5-201ENST00000517224 61 ntBASIC-2.82□□□□□ -2.86
IFT140Q96RY7 RNY4P14-201ENST00000363656 96 ntBASIC-2.83□□□□□ -2.86
IFT140Q96RY7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.83□□□□□ -2.86
IFT140Q96RY7 MIR3611-201ENST00000584484 83 ntBASIC-2.83□□□□□ -2.86
IFT140Q96RY7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.83□□□□□ -2.86
IFT140Q96RY7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.83□□□□□ -2.86
IFT140Q96RY7 AL606534.2-204ENST00000635008 178 ntBASIC-2.83□□□□□ -2.86
IFT140Q96RY7 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 SNORA19.1-201ENST00000410656 129 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 MTND4P17-201ENST00000470444 350 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 RNU6-774P-201ENST00000363238 107 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 RNU6-695P-201ENST00000391157 104 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 RNU6-976P-201ENST00000516086 111 ntBASIC-2.84□□□□□ -2.86
IFT140Q96RY7 RNA5SP93-201ENST00000362525 114 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.85□□□□□ -2.87
IFT140Q96RY7 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 RNU6-980P-201ENST00000516925 103 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 MIR4744-201ENST00000581563 82 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 AC093424.1-201ENST00000604999 338 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 MIR1255B1-201ENST00000636325 63 ntBASIC-2.85□□□□□ -2.87
IFT140Q96RY7 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.86□□□□□ -2.87
IFT140Q96RY7 SNORA24B-201ENST00000384176 131 ntBASIC-2.86□□□□□ -2.87
IFT140Q96RY7 MIR203A-201ENST00000384836 110 ntBASIC-2.86□□□□□ -2.87
IFT140Q96RY7 RNU6-518P-201ENST00000516056 96 ntBASIC-2.86□□□□□ -2.87
IFT140Q96RY7 AC006254.2-201ENST00000603259 279 ntBASIC-2.86□□□□□ -2.87
IFT140Q96RY7 SNORD58B-201ENST00000607313 66 ntBASIC-2.86□□□□□ -2.87
IFT140Q96RY7 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.87□□□□□ -2.87
IFT140Q96RY7 SNORD116-6-201ENST00000384711 96 ntBASIC-2.87□□□□□ -2.87
IFT140Q96RY7 MIR4756-201ENST00000577874 78 ntBASIC-2.87□□□□□ -2.87
IFT140Q96RY7 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.88□□□□□ -2.87
IFT140Q96RY7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.88□□□□□ -2.87
IFT140Q96RY7 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 RNY3P14-201ENST00000384309 102 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 RNU7-30P-201ENST00000516835 62 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 MIR6509-201ENST00000614603 85 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 AC104985.2-201ENST00000620598 500 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 AC021753.1-201ENST00000635724 168 ntBASIC-2.89□□□□□ -2.87
IFT140Q96RY7 RNU6-643P-201ENST00000384018 107 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 AL137067.1-201ENST00000615933 120 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 AL365265.1-201ENST00000621045 234 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 MIR664B-201ENST00000626756 61 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 MIR548U-201ENST00000390728 81 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 RNU6-506P-201ENST00000516553 94 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 AC080013.6-201ENST00000606185 215 ntBASIC-2.9□□□□□ -2.87
IFT140Q96RY7 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 RNU6-382P-201ENST00000365181 106 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 RNU6-132P-201ENST00000383863 107 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 RNU6-578P-201ENST00000390980 103 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 MIR3163-201ENST00000581592 73 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 MIR3657-201ENST00000584818 117 ntBASIC-2.91□□□□□ -2.88
IFT140Q96RY7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.91□□□□□ -2.88
IFT140Q96RY7 MIR521-2-201ENST00000384818 87 ntBASIC-2.92□□□□□ -2.88
IFT140Q96RY7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.92□□□□□ -2.88
IFT140Q96RY7 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.92□□□□□ -2.88
IFT140Q96RY7 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.92□□□□□ -2.88
IFT140Q96RY7 AC092794.1-201ENST00000612734 582 ntBASIC-2.92□□□□□ -2.88
IFT140Q96RY7 RNY1P11-201ENST00000363759 113 ntBASIC-2.93□□□□□ -2.88
IFT140Q96RY7 RNU1-115P-201ENST00000365329 160 ntBASIC-2.93□□□□□ -2.88
IFT140Q96RY7 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.93□□□□□ -2.88
IFT140Q96RY7 AL132765.2-201ENST00000610812 351 ntBASIC-2.93□□□□□ -2.88
IFT140Q96RY7 SNORD50.2-201ENST00000365465 70 ntBASIC-2.94□□□□□ -2.88
IFT140Q96RY7 RNU2-38P-201ENST00000410856 79 ntBASIC-2.94□□□□□ -2.88
IFT140Q96RY7 AL021921.1-201ENST00000442774 93 ntBASIC-2.94□□□□□ -2.88
IFT140Q96RY7 MTND3P3-201ENST00000505004 126 ntBASIC-2.94□□□□□ -2.88
IFT140Q96RY7 AC090574.1-201ENST00000623186 233 ntBASIC-2.94□□□□□ -2.88
IFT140Q96RY7 RNU6-818P-201ENST00000364837 108 ntBASIC-2.95□□□□□ -2.88
IFT140Q96RY7 RNU6-841P-201ENST00000383872 107 ntBASIC-2.95□□□□□ -2.88
IFT140Q96RY7 RNU6-246P-201ENST00000384702 107 ntBASIC-2.95□□□□□ -2.88
IFT140Q96RY7 SNORD2.1-201ENST00000458762 69 ntBASIC-2.95□□□□□ -2.88
IFT140Q96RY7 AC025521.1-201ENST00000621624 286 ntBASIC-2.95□□□□□ -2.88
IFT140Q96RY7 MIR4773-1-201ENST00000637203 78 ntBASIC-2.95□□□□□ -2.88
IFT140Q96RY7 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.96□□□□□ -2.88
IFT140Q96RY7 RNU7-85P-201ENST00000458851 63 ntBASIC-2.96□□□□□ -2.88
IFT140Q96RY7 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.96□□□□□ -2.88
IFT140Q96RY7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.96□□□□□ -2.88
IFT140Q96RY7 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.96□□□□□ -2.88
IFT140Q96RY7 MT-TI-201ENST00000387365 69 ntBASIC-2.96□□□□□ -2.88
IFT140Q96RY7 MIR23C-201ENST00000579846 100 ntBASIC-2.96□□□□□ -2.88
IFT140Q96RY7 SNORD18B-201ENST00000365659 72 ntBASIC-2.97□□□□□ -2.89
IFT140Q96RY7 RNU6-121P-201ENST00000410525 99 ntBASIC-2.97□□□□□ -2.89
IFT140Q96RY7 AL691482.2-201ENST00000457453 84 ntBASIC-2.97□□□□□ -2.89
IFT140Q96RY7 MIR3139-201ENST00000579145 76 ntBASIC-2.97□□□□□ -2.89
IFT140Q96RY7 MIR3064-201ENST00000581130 66 ntBASIC-2.97□□□□□ -2.89
IFT140Q96RY7 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.98□□□□□ -2.89
IFT140Q96RY7 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.98□□□□□ -2.89
IFT140Q96RY7 RNU6-363P-201ENST00000362895 105 ntBASIC-2.98□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms