Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU6-208P-201ENST00000362431 107 ntBASIC1.64□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.64□□□□□ -2.15
SYNGAP1Q96PV0 SNORD101-201ENST00000384027 73 ntBASIC1.64□□□□□ -2.15
SYNGAP1Q96PV0 MIR320A-201ENST00000385302 82 ntBASIC1.64□□□□□ -2.15
SYNGAP1Q96PV0 RNU1-119P-201ENST00000391122 165 ntBASIC1.64□□□□□ -2.15
SYNGAP1Q96PV0 MIRLET7A1-201ENST00000362295 80 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 RNA5SP245-201ENST00000364239 121 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 MIR520F-201ENST00000384824 87 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 SNORD90-201ENST00000391145 111 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 AC097635.1-201ENST00000450678 155 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-557P-201ENST00000516842 110 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 AL590095.2-201ENST00000604136 117 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 AL109933.3-201ENST00000619095 188 ntBASIC1.63□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-1229P-201ENST00000364295 107 ntBASIC1.62□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-291P-201ENST00000384720 107 ntBASIC1.62□□□□□ -2.15
SYNGAP1Q96PV0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.62□□□□□ -2.15
SYNGAP1Q96PV0 Y_RNA.660-201ENST00000516002 120 ntBASIC1.62□□□□□ -2.15
SYNGAP1Q96PV0 U6.100-201ENST00000636230 99 ntBASIC1.62□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-664P-201ENST00000362381 107 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 RNU5F-1-201ENST00000362507 117 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 MIR519A1-201ENST00000385257 85 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-1052P-201ENST00000411398 104 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 RNU6-719P-201ENST00000516671 104 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 MIR5000-201ENST00000577717 103 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 MIR4804-201ENST00000581683 73 ntBASIC1.61□□□□□ -2.15
SYNGAP1Q96PV0 SNORD79.1-201ENST00000516069 84 ntBASIC1.6□□□□□ -2.15
SYNGAP1Q96PV0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
SYNGAP1Q96PV0 AC008608.1-201ENST00000603910 127 ntBASIC1.6□□□□□ -2.15
SYNGAP1Q96PV0 MIR6767-201ENST00000637302 66 ntBASIC1.6□□□□□ -2.15
SYNGAP1Q96PV0 Y_RNA.264-201ENST00000364665 102 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 RNY4P3-201ENST00000365254 95 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 RNU6-1051P-201ENST00000365471 102 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 SCARNA18B-201ENST00000458806 135 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 RNU6-807P-201ENST00000516805 107 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 RNU6-1057P-201ENST00000517162 102 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 MIR4696-201ENST00000581431 70 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.788-201ENST00000622394 112 ntBASIC1.59□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.58□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.545-201ENST00000384652 105 ntBASIC1.58□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.596-201ENST00000410462 109 ntBASIC1.58□□□□□ -2.16
SYNGAP1Q96PV0 MIR924-201ENST00000638017 53 ntBASIC1.58□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.12-201ENST00000362393 112 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 snoU13.17-201ENST00000458802 104 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 RNA5SP330-201ENST00000517096 96 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 MIR3140-201ENST00000583685 90 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.57□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.56□□□□□ -2.16
SYNGAP1Q96PV0 VTRNA1-3-201ENST00000365645 89 ntBASIC1.56□□□□□ -2.16
SYNGAP1Q96PV0 RNU7-56P-201ENST00000458744 62 ntBASIC1.56□□□□□ -2.16
SYNGAP1Q96PV0 MIR3134-201ENST00000579433 74 ntBASIC1.55□□□□□ -2.16
SYNGAP1Q96PV0 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
SYNGAP1Q96PV0 SNORD114-27-201ENST00000363766 70 ntBASIC1.54□□□□□ -2.16
SYNGAP1Q96PV0 RNU6-70P-201ENST00000516438 60 ntBASIC1.54□□□□□ -2.16
SYNGAP1Q96PV0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNGAP1Q96PV0 RNU6-369P-201ENST00000362515 102 ntBASIC1.53□□□□□ -2.16
SYNGAP1Q96PV0 MIR451A-201ENST00000385059 72 ntBASIC1.53□□□□□ -2.16
SYNGAP1Q96PV0 SNORD89-201ENST00000390981 114 ntBASIC1.53□□□□□ -2.16
SYNGAP1Q96PV0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 SNORD115-24-201ENST00000363528 82 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 MIR520H-201ENST00000385126 88 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 RNU6-935P-201ENST00000410371 100 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 AC004223.1-201ENST00000479840 271 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 SNORA31.14-201ENST00000516728 116 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 YWHAEP2-201ENST00000580066 112 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 YWHAEP3-201ENST00000582767 121 ntBASIC1.52□□□□□ -2.17
SYNGAP1Q96PV0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SYNGAP1Q96PV0 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
SYNGAP1Q96PV0 AC002429.1-201ENST00000437672 148 ntBASIC1.51□□□□□ -2.17
SYNGAP1Q96PV0 MIR1297-201ENST00000637311 77 ntBASIC1.51□□□□□ -2.17
SYNGAP1Q96PV0 RNA5SP327-201ENST00000362494 101 ntBASIC1.5□□□□□ -2.17
SYNGAP1Q96PV0 RNA5SP117-201ENST00000365294 118 ntBASIC1.5□□□□□ -2.17
SYNGAP1Q96PV0 RNU6-411P-201ENST00000384451 107 ntBASIC1.5□□□□□ -2.17
SYNGAP1Q96PV0 RNU7-13P-201ENST00000516413 62 ntBASIC1.5□□□□□ -2.17
SYNGAP1Q96PV0 RNU6-303P-201ENST00000517091 106 ntBASIC1.5□□□□□ -2.17
SYNGAP1Q96PV0 Y_RNA.258-201ENST00000364613 105 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 SNORA8.1-201ENST00000384250 140 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 Y_RNA.532-201ENST00000384590 113 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 MIR1827-201ENST00000408549 66 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 RNU6-287P-201ENST00000516230 98 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 MIR664A-201ENST00000626086 82 ntBASIC1.49□□□□□ -2.17
SYNGAP1Q96PV0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.48□□□□□ -2.17
SYNGAP1Q96PV0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNGAP1Q96PV0 AC244505.6-201ENST00000452829 130 ntBASIC1.48□□□□□ -2.17
SYNGAP1Q96PV0 RNU7-104P-201ENST00000459398 79 ntBASIC1.48□□□□□ -2.17
SYNGAP1Q96PV0 AL136317.1-201ENST00000612653 226 ntBASIC1.48□□□□□ -2.17
SYNGAP1Q96PV0 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
SYNGAP1Q96PV0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SYNGAP1Q96PV0 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
SYNGAP1Q96PV0 AC139453.2-201ENST00000487255 133 ntBASIC1.47□□□□□ -2.17
SYNGAP1Q96PV0 RNU6-1265P-201ENST00000516342 103 ntBASIC1.47□□□□□ -2.17
SYNGAP1Q96PV0 uc_338.16-201ENST00000621804 95 ntBASIC1.46□□□□□ -2.18
SYNGAP1Q96PV0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms