Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL137067.1-201ENST00000615933 120 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 AC021753.1-201ENST00000635724 168 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 SNORA63.2-201ENST00000362603 126 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 MIR548A1-201ENST00000385041 97 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 AL078595.1-201ENST00000404458 226 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 AL353691.2-201ENST00000443795 59 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 snoU13.17-201ENST00000458802 104 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 HAR1A.1-201ENST00000459583 118 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 RNY3P16-201ENST00000516338 101 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 CYP3A54P-201ENST00000566950 75 ntBASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.06□□□□□ -2.74
AP1S3Q96PC3 RNY1P11-201ENST00000363759 113 ntBASIC-2.07□□□□□ -2.74
AP1S3Q96PC3 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.07□□□□□ -2.74
AP1S3Q96PC3 RNU6-80P-201ENST00000384195 107 ntBASIC-2.07□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.07□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.07□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.07□□□□□ -2.74
AP1S3Q96PC3 RNU6-818P-201ENST00000364837 108 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 MIR759-201ENST00000390224 91 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 SNORD75.2-201ENST00000408784 58 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 RNU7-85P-201ENST00000458851 63 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 RNU7-24P-201ENST00000458867 62 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 RNA5SP147-201ENST00000516493 109 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 MIR4536-1-201ENST00000583537 88 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.08□□□□□ -2.74
AP1S3Q96PC3 RNU6-540P-201ENST00000384622 101 ntBASIC-2.09□□□□□ -2.74
AP1S3Q96PC3 RNA5SP86-201ENST00000390869 98 ntBASIC-2.09□□□□□ -2.74
AP1S3Q96PC3 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.09□□□□□ -2.74
AP1S3Q96PC3 SNORD19-201ENST00000391191 68 ntBASIC-2.09□□□□□ -2.74
AP1S3Q96PC3 SNORA40.15-201ENST00000516884 107 ntBASIC-2.09□□□□□ -2.74
AP1S3Q96PC3 AC025521.1-201ENST00000621624 286 ntBASIC-2.09□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.1□□□□□ -2.75
AP1S3Q96PC3 RNU6-65P-201ENST00000516332 98 ntBASIC-2.1□□□□□ -2.75
AP1S3Q96PC3 RNU6-720P-201ENST00000516363 108 ntBASIC-2.1□□□□□ -2.75
AP1S3Q96PC3 MIR3149-201ENST00000584629 83 ntBASIC-2.1□□□□□ -2.75
AP1S3Q96PC3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.1□□□□□ -2.75
AP1S3Q96PC3 RNU6-260P-201ENST00000384092 107 ntBASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 RPL35AP4-201ENST00000412007 102 ntBASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 RNU6-158P-201ENST00000517104 100 ntBASIC-2.11□□□□□ -2.75
AP1S3Q96PC3 SNORD50.2-201ENST00000365465 70 ntBASIC-2.12□□□□□ -2.75
AP1S3Q96PC3 AC090616.4-201ENST00000448026 115 ntBASIC-2.12□□□□□ -2.75
AP1S3Q96PC3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.12□□□□□ -2.75
AP1S3Q96PC3 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.12□□□□□ -2.75
AP1S3Q96PC3 MIR3908-201ENST00000579798 126 ntBASIC-2.12□□□□□ -2.75
AP1S3Q96PC3 MIR3163-201ENST00000581592 73 ntBASIC-2.12□□□□□ -2.75
AP1S3Q96PC3 RNU6-363P-201ENST00000362895 105 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 RNU6-774P-201ENST00000363238 107 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 MIR203A-201ENST00000384836 110 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 MIR4643-201ENST00000577473 78 ntBASIC-2.13□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 MIR519A2-201ENST00000384990 87 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 SNORD90-201ENST00000391145 111 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 MIR548H1-201ENST00000408610 102 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 SNORD19B-201ENST00000459623 84 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 RNU6-983P-201ENST00000516004 103 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 U2.14-201ENST00000615943 113 ntBASIC-2.14□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 RNU6-382P-201ENST00000365181 106 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 MT-TL1-201ENST00000386347 75 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 MT-TW-201ENST00000387382 68 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 RNU6-493P-201ENST00000391321 108 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 RNU6-732P-201ENST00000516033 103 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 RNU6-168P-201ENST00000516189 101 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 MIR4441-201ENST00000582623 100 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 U6.106-201ENST00000636360 105 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 MIR5683-201ENST00000636514 76 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 MIR198-201ENST00000637333 62 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 MIR1302-1-201ENST00000637932 143 ntBASIC-2.15□□□□□ -2.75
AP1S3Q96PC3 RNU6-704P-201ENST00000364162 103 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 MIR548AG1-201ENST00000579932 66 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 MIR3064-201ENST00000581130 66 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 AL442128.1-201ENST00000615151 90 ntBASIC-2.16□□□□□ -2.76
AP1S3Q96PC3 MIR365A-201ENST00000362260 87 ntBASIC-2.17□□□□□ -2.76
AP1S3Q96PC3 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.17□□□□□ -2.76
AP1S3Q96PC3 RNU6-275P-201ENST00000364910 107 ntBASIC-2.17□□□□□ -2.76
AP1S3Q96PC3 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.17□□□□□ -2.76
AP1S3Q96PC3 SNORD18.1-201ENST00000363807 70 ntBASIC-2.18□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 231 ms