Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RNA5SP94-201ENST00000516917 108 ntBASIC0.96□□□□□ -2.26
SHDQ96IW2 Y_RNA.239-201ENST00000364444 113 ntBASIC0.95□□□□□ -2.26
SHDQ96IW2 AL606490.4-201ENST00000423117 127 ntBASIC0.95□□□□□ -2.26
SHDQ96IW2 RNU7-74P-201ENST00000459104 62 ntBASIC0.95□□□□□ -2.26
SHDQ96IW2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SHDQ96IW2 Y_RNA.17-201ENST00000362433 111 ntBASIC0.94□□□□□ -2.26
SHDQ96IW2 MIR1236-201ENST00000408340 102 ntBASIC0.94□□□□□ -2.26
SHDQ96IW2 RNU6-75P-201ENST00000515944 104 ntBASIC0.94□□□□□ -2.26
SHDQ96IW2 RNU6-1057P-201ENST00000517162 102 ntBASIC0.94□□□□□ -2.26
SHDQ96IW2 IGLL4P-201ENST00000614590 133 ntBASIC0.94□□□□□ -2.26
SHDQ96IW2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
SHDQ96IW2 RNU6-664P-201ENST00000362381 107 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 RNU4-32P-201ENST00000363404 141 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 RNU6-402P-201ENST00000410678 103 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 Y_RNA.620-201ENST00000411009 88 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 RNA5SP227-201ENST00000516184 113 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 U6.100-201ENST00000636230 99 ntBASIC0.93□□□□□ -2.26
SHDQ96IW2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
SHDQ96IW2 MIR193B-201ENST00000384907 83 ntBASIC0.92□□□□□ -2.26
SHDQ96IW2 RNU6-633P-201ENST00000362612 103 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 SNORD115-37-201ENST00000363768 82 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 MIR450A2-201ENST00000385022 100 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 MIR519C-201ENST00000385053 87 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 RNA5SP268-201ENST00000516828 124 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 MTRNR2L2-201ENST00000604882 87 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 MIR6828-201ENST00000636181 60 ntBASIC0.91□□□□□ -2.26
SHDQ96IW2 RNY1P1-201ENST00000364372 112 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 MIR1273G-201ENST00000577677 100 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 MIR4696-201ENST00000581431 70 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 AC104996.3-201ENST00000590718 94 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 AL590095.2-201ENST00000604136 117 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 AC092634.7-201ENST00000621022 103 ntBASIC0.9□□□□□ -2.27
SHDQ96IW2 RNU6-219P-201ENST00000364728 107 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 SNORD41.1-201ENST00000391000 69 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 MIR3064-201ENST00000581130 66 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 MIR3920-201ENST00000581751 86 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
SHDQ96IW2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SHDQ96IW2 MIRLET7F1-201ENST00000362202 87 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 RNU6-716P-201ENST00000365621 103 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 RNU6-675P-201ENST00000384236 104 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 Y_RNA.593-201ENST00000410292 98 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 RNU6-935P-201ENST00000410371 100 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 RNU6-287P-201ENST00000516230 98 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
SHDQ96IW2 RNU6-509P-201ENST00000363519 107 ntBASIC0.87□□□□□ -2.27
SHDQ96IW2 Y_RNA.207-201ENST00000364142 106 ntBASIC0.87□□□□□ -2.27
SHDQ96IW2 RNU6-726P-201ENST00000364680 107 ntBASIC0.87□□□□□ -2.27
SHDQ96IW2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.87□□□□□ -2.27
SHDQ96IW2 Y_RNA.491-201ENST00000384417 107 ntBASIC0.87□□□□□ -2.27
SHDQ96IW2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SHDQ96IW2 SNORD71-201ENST00000411292 86 ntBASIC0.87□□□□□ -2.27
SHDQ96IW2 SNORA36.1-201ENST00000363424 132 ntBASIC0.86□□□□□ -2.27
SHDQ96IW2 RNY1P8-201ENST00000383970 114 ntBASIC0.86□□□□□ -2.27
SHDQ96IW2 MIR216B-201ENST00000390186 82 ntBASIC0.86□□□□□ -2.27
SHDQ96IW2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SHDQ96IW2 RNU6-132P-201ENST00000383863 107 ntBASIC0.85□□□□□ -2.27
SHDQ96IW2 RNU6-820P-201ENST00000384273 107 ntBASIC0.85□□□□□ -2.27
SHDQ96IW2 SNORA8.2-201ENST00000384372 139 ntBASIC0.85□□□□□ -2.27
SHDQ96IW2 MIR617-201ENST00000385030 97 ntBASIC0.85□□□□□ -2.27
SHDQ96IW2 MIR2113-201ENST00000459007 91 ntBASIC0.85□□□□□ -2.27
SHDQ96IW2 SNORD114-23-201ENST00000363536 72 ntBASIC0.84□□□□□ -2.27
SHDQ96IW2 RNA5SP457-201ENST00000363657 124 ntBASIC0.84□□□□□ -2.27
SHDQ96IW2 SNORA40.8-201ENST00000411034 126 ntBASIC0.84□□□□□ -2.27
SHDQ96IW2 RNU6-267P-201ENST00000516714 103 ntBASIC0.84□□□□□ -2.27
SHDQ96IW2 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
SHDQ96IW2 AC010487.4-201ENST00000637027 61 ntBASIC0.84□□□□□ -2.27
SHDQ96IW2 RNA5SP517-201ENST00000364724 117 ntBASIC0.83□□□□□ -2.28
SHDQ96IW2 RNY4P3-201ENST00000365254 95 ntBASIC0.83□□□□□ -2.28
SHDQ96IW2 SNORA18.5-201ENST00000516616 101 ntBASIC0.83□□□□□ -2.28
SHDQ96IW2 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.83□□□□□ -2.28
SHDQ96IW2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.83□□□□□ -2.28
SHDQ96IW2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SHDQ96IW2 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
SHDQ96IW2 Y_RNA.611-201ENST00000410682 108 ntBASIC0.82□□□□□ -2.28
SHDQ96IW2 MIR4796-201ENST00000580742 81 ntBASIC0.82□□□□□ -2.28
SHDQ96IW2 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.82□□□□□ -2.28
SHDQ96IW2 MIR924-201ENST00000638017 53 ntBASIC0.82□□□□□ -2.28
SHDQ96IW2 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
SHDQ96IW2 MIR494-201ENST00000349529 81 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 SNORD73B-201ENST00000364394 72 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 SNORD115-27-201ENST00000364430 82 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 RNA5SP292-201ENST00000390974 118 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 MIR1302-4-201ENST00000408701 150 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 AC093729.1-201ENST00000513074 128 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 MIR7107-201ENST00000611489 80 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 MIR548BB-201ENST00000626714 66 ntBASIC0.81□□□□□ -2.28
SHDQ96IW2 RNU6-242P-201ENST00000384359 107 ntBASIC0.8□□□□□ -2.28
SHDQ96IW2 MIR451A-201ENST00000385059 72 ntBASIC0.8□□□□□ -2.28
SHDQ96IW2 U3.27-201ENST00000391237 200 ntBASIC0.8□□□□□ -2.28
SHDQ96IW2 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
SHDQ96IW2 AC073869.9-201ENST00000641610 120 ntBASIC0.8□□□□□ -2.28
SHDQ96IW2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.79□□□□□ -2.28
SHDQ96IW2 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms