Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR1827-201ENST00000408549 66 ntBASIC2.03□□□□□ -2.08
HLA-CQ95604 RNA5SP489-201ENST00000410986 109 ntBASIC2.03□□□□□ -2.08
HLA-CQ95604 MIR6504-201ENST00000613520 61 ntBASIC2.03□□□□□ -2.08
HLA-CQ95604 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
HLA-CQ95604 MIR4773-1-201ENST00000637203 78 ntBASIC2.03□□□□□ -2.08
HLA-CQ95604 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HLA-CQ95604 RNU6-382P-201ENST00000365181 106 ntBASIC2.02□□□□□ -2.09
HLA-CQ95604 SNORD45A-201ENST00000384512 84 ntBASIC2.02□□□□□ -2.09
HLA-CQ95604 MIR617-201ENST00000385030 97 ntBASIC2.02□□□□□ -2.09
HLA-CQ95604 AC244098.3-201ENST00000424803 96 ntBASIC2.02□□□□□ -2.09
HLA-CQ95604 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
HLA-CQ95604 AC103706.3-201ENST00000636297 85 ntBASIC2.02□□□□□ -2.09
HLA-CQ95604 Y_RNA.32-201ENST00000362589 110 ntBASIC2.01□□□□□ -2.09
HLA-CQ95604 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
HLA-CQ95604 MIR1276-201ENST00000408707 83 ntBASIC2.01□□□□□ -2.09
HLA-CQ95604 SNORA31.14-201ENST00000516728 116 ntBASIC2.01□□□□□ -2.09
HLA-CQ95604 MIR4303-201ENST00000581299 66 ntBASIC2.01□□□□□ -2.09
HLA-CQ95604 MIR8081-201ENST00000611533 95 ntBASIC2.01□□□□□ -2.09
HLA-CQ95604 SNORD115-24-201ENST00000363528 82 ntBASIC2□□□□□ -2.09
HLA-CQ95604 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2□□□□□ -2.09
HLA-CQ95604 RNU7-74P-201ENST00000459104 62 ntBASIC2□□□□□ -2.09
HLA-CQ95604 MIR3920-201ENST00000581751 86 ntBASIC2□□□□□ -2.09
HLA-CQ95604 AL078603.1-201ENST00000603824 313 ntBASIC2□□□□□ -2.09
HLA-CQ95604 SNORD113.1-201ENST00000363280 73 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 Y_RNA.327-201ENST00000365201 102 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 RNU6-42P-201ENST00000384165 107 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 MIR520F-201ENST00000384824 87 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 RNU7-95P-201ENST00000459222 64 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 SNORA70.22-201ENST00000517160 124 ntBASIC1.99□□□□□ -2.09
HLA-CQ95604 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HLA-CQ95604 Y_RNA.258-201ENST00000364613 105 ntBASIC1.98□□□□□ -2.09
HLA-CQ95604 Y_RNA.540-201ENST00000384638 111 ntBASIC1.98□□□□□ -2.09
HLA-CQ95604 RNU6-604P-201ENST00000390917 100 ntBASIC1.98□□□□□ -2.09
HLA-CQ95604 AC079804.2-201ENST00000490376 200 ntBASIC1.98□□□□□ -2.09
HLA-CQ95604 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-CQ95604 RNU6-495P-201ENST00000362995 107 ntBASIC1.97□□□□□ -2.09
HLA-CQ95604 AL691482.2-201ENST00000457453 84 ntBASIC1.97□□□□□ -2.09
HLA-CQ95604 RNU7-161P-201ENST00000517289 62 ntBASIC1.97□□□□□ -2.09
HLA-CQ95604 MIR4511-201ENST00000582784 87 ntBASIC1.97□□□□□ -2.09
HLA-CQ95604 AL136317.1-201ENST00000612653 226 ntBASIC1.97□□□□□ -2.09
HLA-CQ95604 RMST_2.1-201ENST00000617263 136 ntBASIC1.97□□□□□ -2.09
HLA-CQ95604 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HLA-CQ95604 MIRLET7G-201ENST00000362280 84 ntBASIC1.96□□□□□ -2.1
HLA-CQ95604 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
HLA-CQ95604 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
HLA-CQ95604 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
HLA-CQ95604 RNA5SP480-201ENST00000516840 109 ntBASIC1.96□□□□□ -2.1
HLA-CQ95604 MIR548O2-201ENST00000616090 70 ntBASIC1.96□□□□□ -2.1
HLA-CQ95604 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HLA-CQ95604 RNU6-392P-201ENST00000364926 101 ntBASIC1.95□□□□□ -2.1
HLA-CQ95604 SNORD116-24-201ENST00000384549 92 ntBASIC1.95□□□□□ -2.1
HLA-CQ95604 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-CQ95604 MIR548AG2-201ENST00000581228 64 ntBASIC1.95□□□□□ -2.1
HLA-CQ95604 MIR502-201ENST00000606349 86 ntBASIC1.95□□□□□ -2.1
HLA-CQ95604 AL157834.3-201ENST00000615543 103 ntBASIC1.95□□□□□ -2.1
HLA-CQ95604 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-CQ95604 AC067863.3-201ENST00000624172 122 ntBASIC1.95□□□□□ -2.1
HLA-CQ95604 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
HLA-CQ95604 RNU6-669P-201ENST00000365575 107 ntBASIC1.94□□□□□ -2.1
HLA-CQ95604 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-CQ95604 RNA5SP220-201ENST00000516298 104 ntBASIC1.93□□□□□ -2.1
HLA-CQ95604 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HLA-CQ95604 RNU6-1039P-201ENST00000383931 107 ntBASIC1.92□□□□□ -2.1
HLA-CQ95604 MIR4452-201ENST00000583004 71 ntBASIC1.92□□□□□ -2.1
HLA-CQ95604 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
HLA-CQ95604 MIR4639-201ENST00000584938 69 ntBASIC1.92□□□□□ -2.1
HLA-CQ95604 RNU7-104P-201ENST00000459398 79 ntBASIC1.91□□□□□ -2.1
HLA-CQ95604 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
HLA-CQ95604 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
HLA-CQ95604 MIR6734-201ENST00000621166 68 ntBASIC1.91□□□□□ -2.1
HLA-CQ95604 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
HLA-CQ95604 RNA5SP117-201ENST00000365294 118 ntBASIC1.9□□□□□ -2.11
HLA-CQ95604 MIR519E-201ENST00000385075 84 ntBASIC1.9□□□□□ -2.11
HLA-CQ95604 MTND4LP1-201ENST00000446263 157 ntBASIC1.9□□□□□ -2.11
HLA-CQ95604 AC002350.1-201ENST00000490759 375 ntBASIC1.9□□□□□ -2.11
HLA-CQ95604 RNU6-1110P-201ENST00000516462 101 ntBASIC1.9□□□□□ -2.11
HLA-CQ95604 AC069503.3-201ENST00000618674 145 ntBASIC1.9□□□□□ -2.11
HLA-CQ95604 SNORD41.1-201ENST00000391000 69 ntBASIC1.89□□□□□ -2.11
HLA-CQ95604 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
HLA-CQ95604 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
HLA-CQ95604 AC073869.9-201ENST00000641610 120 ntBASIC1.89□□□□□ -2.11
HLA-CQ95604 RNU1-123P-201ENST00000458950 160 ntBASIC1.88□□□□□ -2.11
HLA-CQ95604 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.88□□□□□ -2.11
HLA-CQ95604 RNU6-469P-201ENST00000516253 101 ntBASIC1.88□□□□□ -2.11
HLA-CQ95604 AP000553.5-201ENST00000641933 54 ntBASIC1.88□□□□□ -2.11
HLA-CQ95604 FABP5P4-201ENST00000437203 171 ntBASIC1.87□□□□□ -2.11
HLA-CQ95604 AC002429.1-201ENST00000437672 148 ntBASIC1.87□□□□□ -2.11
HLA-CQ95604 MIR6509-201ENST00000614603 85 ntBASIC1.87□□□□□ -2.11
HLA-CQ95604 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
HLA-CQ95604 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
HLA-CQ95604 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
HLA-CQ95604 RNU6-499P-201ENST00000365615 107 ntBASIC1.85□□□□□ -2.11
HLA-CQ95604 MIR222-201ENST00000384992 110 ntBASIC1.85□□□□□ -2.11
HLA-CQ95604 U7.7-201ENST00000459276 60 ntBASIC1.85□□□□□ -2.11
HLA-CQ95604 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-CQ95604 SNORD28-201ENST00000384706 75 ntBASIC1.84□□□□□ -2.11
HLA-CQ95604 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.84□□□□□ -2.11
HLA-CQ95604 AC110620.1-201ENST00000416042 228 ntBASIC1.84□□□□□ -2.11
HLA-CQ95604 AC104435.1-201ENST00000483483 166 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms