Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 snoU13.17-201ENST00000458802 104 ntBASIC1.54□□□□□ -2.16
DEPDC4Q8N2C3 MIR3920-201ENST00000581751 86 ntBASIC1.54□□□□□ -2.16
DEPDC4Q8N2C3 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.54□□□□□ -2.16
DEPDC4Q8N2C3 SNORA24B-201ENST00000384176 131 ntBASIC1.53□□□□□ -2.16
DEPDC4Q8N2C3 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
DEPDC4Q8N2C3 AC074348.1-201ENST00000426503 132 ntBASIC1.53□□□□□ -2.16
DEPDC4Q8N2C3 AC003989.2-201ENST00000440224 169 ntBASIC1.53□□□□□ -2.16
DEPDC4Q8N2C3 snoU13.18-201ENST00000459483 104 ntBASIC1.53□□□□□ -2.16
DEPDC4Q8N2C3 AC067863.3-201ENST00000624172 122 ntBASIC1.53□□□□□ -2.16
DEPDC4Q8N2C3 Y_RNA.12-201ENST00000362393 112 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 Y_RNA.545-201ENST00000384652 105 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 SNORD28-201ENST00000384706 75 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 MIR618-201ENST00000385287 98 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 MIR2113-201ENST00000459007 91 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 AC097510.1-201ENST00000510945 133 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 RNA5SP255-201ENST00000516370 107 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 MIR3140-201ENST00000583685 90 ntBASIC1.52□□□□□ -2.17
DEPDC4Q8N2C3 MIR617-201ENST00000385030 97 ntBASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 MIR644A-201ENST00000385262 94 ntBASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 Y_RNA.606-201ENST00000410579 103 ntBASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 RNU7-104P-201ENST00000459398 79 ntBASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
DEPDC4Q8N2C3 MIR26B-201ENST00000362251 77 ntBASIC1.5□□□□□ -2.17
DEPDC4Q8N2C3 RNU6-681P-201ENST00000364012 104 ntBASIC1.5□□□□□ -2.17
DEPDC4Q8N2C3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
DEPDC4Q8N2C3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.5□□□□□ -2.17
DEPDC4Q8N2C3 RNU7-74P-201ENST00000459104 62 ntBASIC1.5□□□□□ -2.17
DEPDC4Q8N2C3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.5□□□□□ -2.17
DEPDC4Q8N2C3 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
DEPDC4Q8N2C3 Y_RNA.565-201ENST00000384719 101 ntBASIC1.49□□□□□ -2.17
DEPDC4Q8N2C3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.49□□□□□ -2.17
DEPDC4Q8N2C3 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
DEPDC4Q8N2C3 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
DEPDC4Q8N2C3 RNU6-340P-201ENST00000364005 107 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 RNU4-45P-201ENST00000365469 141 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 SNORD41.1-201ENST00000391000 69 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 SCARNA18B-201ENST00000458806 135 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 MIR548AG2-201ENST00000581228 64 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 AC244669.1-204ENST00000621564 178 ntBASIC1.48□□□□□ -2.17
DEPDC4Q8N2C3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
DEPDC4Q8N2C3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
DEPDC4Q8N2C3 SNORD18A-201ENST00000363753 72 ntBASIC1.47□□□□□ -2.17
DEPDC4Q8N2C3 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
DEPDC4Q8N2C3 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
DEPDC4Q8N2C3 RNA5SP47-201ENST00000517230 109 ntBASIC1.46□□□□□ -2.18
DEPDC4Q8N2C3 MIR3678-201ENST00000578455 94 ntBASIC1.46□□□□□ -2.18
DEPDC4Q8N2C3 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
DEPDC4Q8N2C3 U6.81-201ENST00000612550 106 ntBASIC1.46□□□□□ -2.18
DEPDC4Q8N2C3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
DEPDC4Q8N2C3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.45□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.45□□□□□ -2.18
DEPDC4Q8N2C3 AC004223.1-201ENST00000479840 271 ntBASIC1.45□□□□□ -2.18
DEPDC4Q8N2C3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.45□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-411P-201ENST00000384451 107 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-1177P-201ENST00000391058 104 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-1052P-201ENST00000411398 104 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-719P-201ENST00000516671 104 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 MIR4484-201ENST00000582855 83 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.44□□□□□ -2.18
DEPDC4Q8N2C3 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
DEPDC4Q8N2C3 MIR1276-201ENST00000408707 83 ntBASIC1.43□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
DEPDC4Q8N2C3 MIR6504-201ENST00000613520 61 ntBASIC1.43□□□□□ -2.18
DEPDC4Q8N2C3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-392P-201ENST00000364926 101 ntBASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 MIR519E-201ENST00000385075 84 ntBASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
DEPDC4Q8N2C3 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-726P-201ENST00000364680 107 ntBASIC1.41□□□□□ -2.18
DEPDC4Q8N2C3 MIR3134-201ENST00000579433 74 ntBASIC1.41□□□□□ -2.18
DEPDC4Q8N2C3 RNU6-824P-201ENST00000363724 104 ntBASIC1.4□□□□□ -2.19
DEPDC4Q8N2C3 MIR7-2-201ENST00000384970 110 ntBASIC1.4□□□□□ -2.19
DEPDC4Q8N2C3 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
DEPDC4Q8N2C3 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
DEPDC4Q8N2C3 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
DEPDC4Q8N2C3 MIR6828-201ENST00000636181 60 ntBASIC1.4□□□□□ -2.19
DEPDC4Q8N2C3 RNU6-154P-201ENST00000384306 106 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 MIR548L-201ENST00000408303 86 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 SNORD99-201ENST00000408612 74 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 AC244098.3-201ENST00000424803 96 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 RNU6-871P-201ENST00000516122 100 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 RNU6-523P-201ENST00000516304 54 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 RNU6-70P-201ENST00000516438 60 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 MIR548O2-201ENST00000616090 70 ntBASIC1.39□□□□□ -2.19
DEPDC4Q8N2C3 MIR18A-201ENST00000362310 71 ntBASIC1.38□□□□□ -2.19
DEPDC4Q8N2C3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.38□□□□□ -2.19
DEPDC4Q8N2C3 RNU7-24P-201ENST00000458867 62 ntBASIC1.38□□□□□ -2.19
DEPDC4Q8N2C3 RNU6-752P-201ENST00000516376 102 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms