Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RNA5SP268-201ENST00000516828 124 ntBASIC0.48□□□□□ -2.33
ZNF440Q8IYI8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.48□□□□□ -2.33
ZNF440Q8IYI8 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
ZNF440Q8IYI8 MIR7107-201ENST00000611489 80 ntBASIC0.48□□□□□ -2.33
ZNF440Q8IYI8 RNU6-664P-201ENST00000362381 107 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 SNORD101-201ENST00000384027 73 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 SNORA8.2-201ENST00000384372 139 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 Y_RNA.596-201ENST00000410462 109 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 Y_RNA.620-201ENST00000411009 88 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 RNA5SP227-201ENST00000516184 113 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 RNU7-153P-201ENST00000516455 62 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
ZNF440Q8IYI8 SNORD116-22-201ENST00000384430 92 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 MIR518E-201ENST00000385252 88 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 SNORD41.1-201ENST00000391000 69 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 SNORD90-201ENST00000391145 111 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 MIR548L-201ENST00000408303 86 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 MIR548J-201ENST00000408833 112 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 RNU6-762P-201ENST00000517107 102 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 MIR3064-201ENST00000581130 66 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 MIR151B-201ENST00000584249 96 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
ZNF440Q8IYI8 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.73-201ENST00000362910 113 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 RNU6-269P-201ENST00000391077 97 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 MIR4752-201ENST00000579672 72 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 MIR4679-1-201ENST00000637619 75 ntBASIC0.45□□□□□ -2.34
ZNF440Q8IYI8 RNU6-633P-201ENST00000362612 103 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 RNU6-811P-201ENST00000384069 107 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 AC069271.1-201ENST00000445577 156 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 MIR2113-201ENST00000459007 91 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 SNORA18.5-201ENST00000516616 101 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 AC104996.3-201ENST00000590718 94 ntBASIC0.44□□□□□ -2.34
ZNF440Q8IYI8 MIR494-201ENST00000349529 81 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 SNORD118-201ENST00000363593 134 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 SNORD73B-201ENST00000364394 72 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 RNU6-497P-201ENST00000365316 104 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 RNU6-675P-201ENST00000384236 104 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 MIR519E-201ENST00000385075 84 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 RNU6-1052P-201ENST00000411398 104 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 RNU6-719P-201ENST00000516671 104 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 MIR5000-201ENST00000577717 103 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.43□□□□□ -2.34
ZNF440Q8IYI8 RNU6-509P-201ENST00000363519 107 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 SNORD115-44-201ENST00000365391 82 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.491-201ENST00000384417 107 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 MIR3140-201ENST00000583685 90 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 AC006254.2-201ENST00000603259 279 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 AC062037.1-201ENST00000605302 128 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 MIR548BB-201ENST00000626714 66 ntBASIC0.42□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.226-201ENST00000364337 114 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 Y_RNA.558-201ENST00000384685 113 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 MIR617-201ENST00000385030 97 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 MIR519C-201ENST00000385053 87 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 MIR548U-201ENST00000390728 81 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 RNU6-935P-201ENST00000410371 100 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 RNU1-29P-201ENST00000606574 126 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.41□□□□□ -2.34
ZNF440Q8IYI8 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 RNY1P1-201ENST00000364372 112 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 MIR451A-201ENST00000385059 72 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 MIR1236-201ENST00000408340 102 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 MIR1287-201ENST00000408492 90 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 Y_RNA.611-201ENST00000410682 108 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 RNA5SP484-201ENST00000458857 111 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 SNORA70.25-201ENST00000612741 95 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 IGLL4P-201ENST00000614590 133 ntBASIC0.4□□□□□ -2.35
ZNF440Q8IYI8 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
ZNF440Q8IYI8 AC093423.1-201ENST00000440817 142 ntBASIC0.39□□□□□ -2.35
ZNF440Q8IYI8 FGF7P7-201ENST00000514120 227 ntBASIC0.39□□□□□ -2.35
ZNF440Q8IYI8 MIR4796-201ENST00000580742 81 ntBASIC0.39□□□□□ -2.35
ZNF440Q8IYI8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.39□□□□□ -2.35
ZNF440Q8IYI8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
ZNF440Q8IYI8 Y_RNA.388-201ENST00000383919 113 ntBASIC0.38□□□□□ -2.35
ZNF440Q8IYI8 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
ZNF440Q8IYI8 MIR450A2-201ENST00000385022 100 ntBASIC0.38□□□□□ -2.35
ZNF440Q8IYI8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 258 ms