Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC138305.3-201ENST00000624988 240 ntBASIC-1.6□□□□□ -2.66
CSPG4Q6UVK1 RNU6-832P-201ENST00000363319 107 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 RNU6-151P-201ENST00000364158 107 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 MIR513C-201ENST00000401352 84 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 VN1R91P-201ENST00000594377 169 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.6□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU7-169P-201ENST00000459456 61 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU7-4P-201ENST00000516961 62 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 AC037487.3-201ENST00000606668 112 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU6-132P-201ENST00000383863 107 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU6-510P-201ENST00000391239 108 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNY4P20-201ENST00000516678 93 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 AC025521.1-201ENST00000621624 286 ntBASIC-1.61□□□□□ -2.67
CSPG4Q6UVK1 RNU6-103P-201ENST00000363686 107 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 RNU6-561P-201ENST00000516222 102 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 SNORA20.3-201ENST00000516880 132 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 AL512310.12-203ENST00000640543 90 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 SNORD113-6-201ENST00000363345 75 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 RNU6-521P-201ENST00000516663 105 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 AL513043.2-201ENST00000573941 143 ntBASIC-1.62□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 MT-TI-201ENST00000387365 69 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 RNU4-43P-201ENST00000410628 137 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 AL442128.1-201ENST00000615151 90 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 AC021753.1-201ENST00000635724 168 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 RNU6-363P-201ENST00000362895 105 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 MT-TW-201ENST00000387382 68 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 RNU6-240P-201ENST00000516098 97 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 AC092794.1-201ENST00000612734 582 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 MIR4773-1-201ENST00000637203 78 ntBASIC-1.63□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.64□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.64□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.64□□□□□ -2.67
CSPG4Q6UVK1 MIR4272-201ENST00000635924 64 ntBASIC-1.64□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 AL691482.2-201ENST00000457453 84 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 RNU6-120P-201ENST00000516077 103 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 RNU6-264P-201ENST00000517134 104 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 RNU6-259P-201ENST00000383999 107 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 AC096644.2-201ENST00000429278 159 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 MIR548W-201ENST00000581970 74 ntBASIC-1.65□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 FGF7P7-201ENST00000514120 227 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 RNU6-311P-201ENST00000516224 102 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 AL606534.2-204ENST00000635008 178 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 MIR1255B1-201ENST00000636325 63 ntBASIC-1.66□□□□□ -2.67
CSPG4Q6UVK1 RNU5F-1-201ENST00000362507 117 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RNU6-451P-201ENST00000362921 107 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RNY4P9-201ENST00000363194 97 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RNU6-382P-201ENST00000365181 106 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 SNORD50.2-201ENST00000365465 70 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 MIR548G-201ENST00000408442 89 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RBMX2P4-201ENST00000441256 376 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RNU7-164P-201ENST00000459221 62 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 RNU6-976P-201ENST00000516086 111 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 MIR23C-201ENST00000579846 100 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 U6.58-201ENST00000613107 107 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 AL137067.1-201ENST00000615933 120 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 AL359880.1-201ENST00000621879 266 ntBASIC-1.66□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 MIR122-201ENST00000385044 85 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 MIR548I1-201ENST00000408810 149 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.67□□□□□ -2.68
CSPG4Q6UVK1 RNU7-85P-201ENST00000458851 63 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms