Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.22□□□□□ -2.37
RUNDC3AQ59EK9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 MIR617-201ENST00000385030 97 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 MIR519E-201ENST00000385075 84 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 MIR2113-201ENST00000459007 91 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 Y_RNA.648-201ENST00000459455 110 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 SCARNA23-201ENST00000516060 130 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-287P-201ENST00000516230 98 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-537P-201ENST00000517277 103 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 NAMPTP3-201ENST00000569273 224 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 MIR5706-201ENST00000579841 80 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 AC103810.7-201ENST00000607821 91 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
RUNDC3AQ59EK9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RUNDC3AQ59EK9 SNORA51.5-201ENST00000384126 131 ntBASIC0.2□□□□□ -2.38
RUNDC3AQ59EK9 MIR590-201ENST00000385008 97 ntBASIC0.2□□□□□ -2.38
RUNDC3AQ59EK9 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-1081P-201ENST00000384537 107 ntBASIC0.19□□□□□ -2.38
RUNDC3AQ59EK9 MIR501-201ENST00000390204 84 ntBASIC0.19□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-127P-201ENST00000390897 107 ntBASIC0.19□□□□□ -2.38
RUNDC3AQ59EK9 AC006210.1-201ENST00000424882 111 ntBASIC0.19□□□□□ -2.38
RUNDC3AQ59EK9 MIR499B-201ENST00000636498 73 ntBASIC0.19□□□□□ -2.38
RUNDC3AQ59EK9 AC010487.4-201ENST00000637027 61 ntBASIC0.19□□□□□ -2.38
RUNDC3AQ59EK9 Y_RNA.207-201ENST00000364142 106 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 RNU1-141P-201ENST00000364623 158 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 MIR193B-201ENST00000384907 83 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 SNORD110-201ENST00000408189 75 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 Y_RNA.629-201ENST00000411368 105 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 AC093423.1-201ENST00000440817 142 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-75P-201ENST00000515944 104 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
RUNDC3AQ59EK9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
RUNDC3AQ59EK9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
RUNDC3AQ59EK9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.17□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-1290P-201ENST00000362957 109 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-1325P-201ENST00000364905 105 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 SNORD101-201ENST00000384027 73 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 RNY4P18-201ENST00000391107 89 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-644P-201ENST00000391155 98 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 RNU7-85P-201ENST00000458851 63 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 MIR4696-201ENST00000581431 70 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 U2.22-201ENST00000636441 106 ntBASIC0.16□□□□□ -2.38
RUNDC3AQ59EK9 RNU6-664P-201ENST00000362381 107 ntBASIC0.15□□□□□ -2.39
RUNDC3AQ59EK9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.15□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-756P-201ENST00000383997 107 ntBASIC0.15□□□□□ -2.39
RUNDC3AQ59EK9 HMGN2P22-201ENST00000427588 175 ntBASIC0.15□□□□□ -2.39
RUNDC3AQ59EK9 MIR548AD-201ENST00000584780 82 ntBASIC0.15□□□□□ -2.39
RUNDC3AQ59EK9 U7.6-201ENST00000610841 64 ntBASIC0.15□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-109P-201ENST00000516364 107 ntBASIC0.14□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-184P-201ENST00000516514 107 ntBASIC0.14□□□□□ -2.39
RUNDC3AQ59EK9 RNA5SP480-201ENST00000516840 109 ntBASIC0.14□□□□□ -2.39
RUNDC3AQ59EK9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.14□□□□□ -2.39
RUNDC3AQ59EK9 MIR1273G-201ENST00000577677 100 ntBASIC0.14□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-766P-201ENST00000362478 107 ntBASIC0.13□□□□□ -2.39
RUNDC3AQ59EK9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.13□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-1113P-201ENST00000384348 107 ntBASIC0.13□□□□□ -2.39
RUNDC3AQ59EK9 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
RUNDC3AQ59EK9 MIR4677-201ENST00000584153 80 ntBASIC0.13□□□□□ -2.39
RUNDC3AQ59EK9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.12□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-65P-201ENST00000516332 98 ntBASIC0.12□□□□□ -2.39
RUNDC3AQ59EK9 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
RUNDC3AQ59EK9 Y_RNA.818-201ENST00000618813 71 ntBASIC0.12□□□□□ -2.39
RUNDC3AQ59EK9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-972P-201ENST00000391208 107 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-935P-201ENST00000410371 100 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-887P-201ENST00000410660 100 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 RNU6-782P-201ENST00000516852 104 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 MIR4536-1-201ENST00000583537 88 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 AC069503.3-201ENST00000618674 145 ntBASIC0.11□□□□□ -2.39
RUNDC3AQ59EK9 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
RUNDC3AQ59EK9 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
RUNDC3AQ59EK9 RNU7-61P-201ENST00000515897 61 ntBASIC0.1□□□□□ -2.39
RUNDC3AQ59EK9 MIR4460-201ENST00000577862 86 ntBASIC0.1□□□□□ -2.39
RUNDC3AQ59EK9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
RUNDC3AQ59EK9 MIRLET7F1-201ENST00000362202 87 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 SNORD114-26-201ENST00000363543 72 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.291-201ENST00000364886 113 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 RNU6-215P-201ENST00000365169 102 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 SNORD58A-201ENST00000383875 65 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 MT-TY-201ENST00000387409 66 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 MIR1197-201ENST00000408818 88 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 SNORA25.13-201ENST00000516395 103 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 SNORA62.5-201ENST00000516634 120 ntBASIC0.09□□□□□ -2.4
RUNDC3AQ59EK9 MIR450A1-201ENST00000362262 91 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 Y_RNA.96-201ENST00000363092 109 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 AL031737.1-201ENST00000450125 223 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 SNORD4B-201ENST00000459083 72 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 MIR4473-201ENST00000583731 91 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 MIR3925-201ENST00000584674 77 ntBASIC0.08□□□□□ -2.4
RUNDC3AQ59EK9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms