Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 MIR1827-201ENST00000408549 66 ntBASIC3.3□□□□□ -1.88
NCBP3Q53F19 SNORD79.1-201ENST00000516069 84 ntBASIC3.3□□□□□ -1.88
NCBP3Q53F19 RNU5B-6P-201ENST00000516765 68 ntBASIC3.3□□□□□ -1.88
NCBP3Q53F19 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NCBP3Q53F19 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NCBP3Q53F19 RNU6ATAC8P-201ENST00000408460 126 ntBASIC3.29□□□□□ -1.88
NCBP3Q53F19 AC079804.2-201ENST00000490376 200 ntBASIC3.29□□□□□ -1.88
NCBP3Q53F19 AC002350.1-201ENST00000490759 375 ntBASIC3.29□□□□□ -1.88
NCBP3Q53F19 RNA5SP320-201ENST00000516263 124 ntBASIC3.29□□□□□ -1.88
NCBP3Q53F19 RNU6-698P-201ENST00000363523 107 ntBASIC3.28□□□□□ -1.88
NCBP3Q53F19 RNU6-34P-201ENST00000364874 107 ntBASIC3.28□□□□□ -1.88
NCBP3Q53F19 RNU6-520P-201ENST00000384717 104 ntBASIC3.28□□□□□ -1.88
NCBP3Q53F19 MIR4639-201ENST00000584938 69 ntBASIC3.28□□□□□ -1.88
NCBP3Q53F19 MIR6715A-201ENST00000615929 79 ntBASIC3.28□□□□□ -1.88
NCBP3Q53F19 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC3.28□□□□□ -1.88
NCBP3Q53F19 MIR6073-201ENST00000352083 89 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 SNORD28-201ENST00000384706 75 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 RNU7-174P-201ENST00000516248 59 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 RNU6-469P-201ENST00000516253 101 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 RNU6-135P-201ENST00000516769 101 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 MIR4422-201ENST00000581938 83 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 MIR4781-201ENST00000585250 76 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 U2.7-201ENST00000619197 100 ntBASIC3.27□□□□□ -1.89
NCBP3Q53F19 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.26□□□□□ -1.89
NCBP3Q53F19 RNU6-753P-201ENST00000363926 107 ntBASIC3.26□□□□□ -1.89
NCBP3Q53F19 RNU1-141P-201ENST00000364623 158 ntBASIC3.26□□□□□ -1.89
NCBP3Q53F19 MIR6817-201ENST00000615588 66 ntBASIC3.26□□□□□ -1.89
NCBP3Q53F19 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NCBP3Q53F19 AC021146.9-201ENST00000512503 156 ntBASIC3.25□□□□□ -1.89
NCBP3Q53F19 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.25□□□□□ -1.89
NCBP3Q53F19 RNU1-78P-201ENST00000391248 165 ntBASIC3.24□□□□□ -1.89
NCBP3Q53F19 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
NCBP3Q53F19 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC3.24□□□□□ -1.89
NCBP3Q53F19 U4.4-201ENST00000620626 117 ntBASIC3.24□□□□□ -1.89
NCBP3Q53F19 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
NCBP3Q53F19 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.23□□□□□ -1.89
NCBP3Q53F19 MIR1291-201ENST00000627649 87 ntBASIC3.23□□□□□ -1.89
NCBP3Q53F19 HMGN2P38-201ENST00000423806 265 ntBASIC3.22□□□□□ -1.89
NCBP3Q53F19 AC104984.5-201ENST00000586878 94 ntBASIC3.22□□□□□ -1.89
NCBP3Q53F19 uc_338.10-201ENST00000621872 182 ntBASIC3.22□□□□□ -1.89
NCBP3Q53F19 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NCBP3Q53F19 RNU6-716P-201ENST00000365621 103 ntBASIC3.21□□□□□ -1.9
NCBP3Q53F19 MIR1261-201ENST00000408659 82 ntBASIC3.21□□□□□ -1.9
NCBP3Q53F19 RNA5SP148-201ENST00000516527 94 ntBASIC3.21□□□□□ -1.9
NCBP3Q53F19 RNU6-726P-201ENST00000364680 107 ntBASIC3.2□□□□□ -1.9
NCBP3Q53F19 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NCBP3Q53F19 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.19□□□□□ -1.9
NCBP3Q53F19 MIR5007-201ENST00000583098 95 ntBASIC3.19□□□□□ -1.9
NCBP3Q53F19 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NCBP3Q53F19 SNORA33.1-201ENST00000364957 130 ntBASIC3.17□□□□□ -1.9
NCBP3Q53F19 SNORA70.22-201ENST00000517160 124 ntBASIC3.17□□□□□ -1.9
NCBP3Q53F19 SNORA15B-2-201ENST00000384058 135 ntBASIC3.16□□□□□ -1.9
NCBP3Q53F19 SNORA15B-1-201ENST00000384334 135 ntBASIC3.16□□□□□ -1.9
NCBP3Q53F19 MIR3945-201ENST00000581853 98 ntBASIC3.16□□□□□ -1.9
NCBP3Q53F19 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC3.16□□□□□ -1.9
NCBP3Q53F19 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NCBP3Q53F19 MIR21-201ENST00000362134 72 ntBASIC3.15□□□□□ -1.91
NCBP3Q53F19 Y_RNA.125-201ENST00000363371 111 ntBASIC3.15□□□□□ -1.91
NCBP3Q53F19 DEFA7P-201ENST00000382676 285 ntBASIC3.15□□□□□ -1.91
NCBP3Q53F19 RNU6-269P-201ENST00000391077 97 ntBASIC3.15□□□□□ -1.91
NCBP3Q53F19 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NCBP3Q53F19 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NCBP3Q53F19 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NCBP3Q53F19 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NCBP3Q53F19 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
NCBP3Q53F19 SNORD18A-201ENST00000363753 72 ntBASIC3.12□□□□□ -1.91
NCBP3Q53F19 RNA5SP484-201ENST00000458857 111 ntBASIC3.12□□□□□ -1.91
NCBP3Q53F19 RNU7-119P-201ENST00000459279 63 ntBASIC3.12□□□□□ -1.91
NCBP3Q53F19 AC026436.1-201ENST00000510537 270 ntBASIC3.12□□□□□ -1.91
NCBP3Q53F19 AC015712.3-201ENST00000559380 164 ntBASIC3.12□□□□□ -1.91
NCBP3Q53F19 RNA5SP24-201ENST00000516478 95 ntBASIC3.11□□□□□ -1.91
NCBP3Q53F19 SNORA8.2-201ENST00000384372 139 ntBASIC3.1□□□□□ -1.91
NCBP3Q53F19 MIR758-201ENST00000390227 88 ntBASIC3.1□□□□□ -1.91
NCBP3Q53F19 RNA5SP47-201ENST00000517230 109 ntBASIC3.1□□□□□ -1.91
NCBP3Q53F19 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
NCBP3Q53F19 SNORA41B-201ENST00000384785 128 ntBASIC3.09□□□□□ -1.91
NCBP3Q53F19 SNORD89-201ENST00000390981 114 ntBASIC3.09□□□□□ -1.91
NCBP3Q53F19 Y_RNA.633-201ENST00000459107 95 ntBASIC3.09□□□□□ -1.91
NCBP3Q53F19 RNU6-548P-201ENST00000517083 115 ntBASIC3.09□□□□□ -1.91
NCBP3Q53F19 SNORD114-30-201ENST00000364448 72 ntBASIC3.08□□□□□ -1.92
NCBP3Q53F19 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
NCBP3Q53F19 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCBP3Q53F19 Y_RNA.246-201ENST00000364495 108 ntBASIC3.07□□□□□ -1.92
NCBP3Q53F19 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCBP3Q53F19 Y_RNA.325-201ENST00000365171 122 ntBASIC3.06□□□□□ -1.92
NCBP3Q53F19 MIR222-201ENST00000384992 110 ntBASIC3.06□□□□□ -1.92
NCBP3Q53F19 RNA5SP181-201ENST00000410246 98 ntBASIC3.06□□□□□ -1.92
NCBP3Q53F19 AC046143.2-201ENST00000609789 160 ntBASIC3.06□□□□□ -1.92
NCBP3Q53F19 RNU4-52P-201ENST00000384209 138 ntBASIC3.05□□□□□ -1.92
NCBP3Q53F19 SNORA70B-201ENST00000384210 135 ntBASIC3.05□□□□□ -1.92
NCBP3Q53F19 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC3.05□□□□□ -1.92
NCBP3Q53F19 MIR4285-201ENST00000581001 85 ntBASIC3.05□□□□□ -1.92
NCBP3Q53F19 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.05□□□□□ -1.92
NCBP3Q53F19 MIR6766-201ENST00000622641 72 ntBASIC3.05□□□□□ -1.92
NCBP3Q53F19 SNORA63.6-201ENST00000364921 119 ntBASIC3.04□□□□□ -1.92
NCBP3Q53F19 AC002429.1-201ENST00000437672 148 ntBASIC3.04□□□□□ -1.92
NCBP3Q53F19 SNORD12-201ENST00000391002 90 ntBASIC3.03□□□□□ -1.92
NCBP3Q53F19 MIR3678-201ENST00000578455 94 ntBASIC3.03□□□□□ -1.92
NCBP3Q53F19 Z82195.2-201ENST00000612348 18351 ntBASIC3.02□□□□□ -1.93
NCBP3Q53F19 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms