Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.44□□□□□ -2.96
CCDC58Q4VC31 RNU2-38P-201ENST00000410856 79 ntBASIC-3.44□□□□□ -2.96
CCDC58Q4VC31 RNU6-521P-201ENST00000516663 105 ntBASIC-3.44□□□□□ -2.96
CCDC58Q4VC31 AL603755.1-201ENST00000619504 163 ntBASIC-3.44□□□□□ -2.96
CCDC58Q4VC31 MTND5P26-201ENST00000426018 1752 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 RNU6-382P-201ENST00000365181 106 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 RNU6-956P-201ENST00000458868 103 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 RNU7-164P-201ENST00000459221 62 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 DLEU2_2.2-201ENST00000615474 90 ntBASIC-3.45□□□□□ -2.96
CCDC58Q4VC31 RNU6-696P-201ENST00000390834 107 ntBASIC-3.46□□□□□ -2.96
CCDC58Q4VC31 MIR548G-201ENST00000408442 89 ntBASIC-3.46□□□□□ -2.96
CCDC58Q4VC31 AC097484.2-201ENST00000509147 251 ntBASIC-3.46□□□□□ -2.96
CCDC58Q4VC31 SNORD116-25-201ENST00000516517 92 ntBASIC-3.46□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.695-201ENST00000516715 107 ntBASIC-3.46□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.88-201ENST00000363029 99 ntBASIC-3.47□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.47□□□□□ -2.96
CCDC58Q4VC31 AC021443.1-201ENST00000604478 211 ntBASIC-3.47□□□□□ -2.96
CCDC58Q4VC31 MIR6509-201ENST00000614603 85 ntBASIC-3.47□□□□□ -2.96
CCDC58Q4VC31 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.48□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.48□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.569-201ENST00000384749 103 ntBASIC-3.48□□□□□ -2.97
CCDC58Q4VC31 MIR616-201ENST00000385293 97 ntBASIC-3.48□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.339-201ENST00000365325 102 ntBASIC-3.49□□□□□ -2.97
CCDC58Q4VC31 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.49□□□□□ -2.97
CCDC58Q4VC31 AC092794.1-201ENST00000612734 582 ntBASIC-3.49□□□□□ -2.97
CCDC58Q4VC31 RNU1-115P-201ENST00000365329 160 ntBASIC-3.5□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.352-201ENST00000365439 102 ntBASIC-3.5□□□□□ -2.97
CCDC58Q4VC31 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.5□□□□□ -2.97
CCDC58Q4VC31 AC006254.2-201ENST00000603259 279 ntBASIC-3.5□□□□□ -2.97
CCDC58Q4VC31 AC013734.1-201ENST00000619329 111 ntBASIC-3.5□□□□□ -2.97
CCDC58Q4VC31 UBE2WP1-201ENST00000362030 340 ntBASIC-3.51□□□□□ -2.97
CCDC58Q4VC31 RNU6-584P-201ENST00000410350 95 ntBASIC-3.51□□□□□ -2.97
CCDC58Q4VC31 RBMX2P4-201ENST00000441256 376 ntBASIC-3.51□□□□□ -2.97
CCDC58Q4VC31 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.51□□□□□ -2.97
CCDC58Q4VC31 RNU6-453P-201ENST00000516819 85 ntBASIC-3.51□□□□□ -2.97
CCDC58Q4VC31 snoU18.1-201ENST00000629629 71 ntBASIC-3.51□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.217-201ENST00000364214 105 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 RNU6-662P-201ENST00000384253 104 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 RNU6-651P-201ENST00000411040 105 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 AC099799.1-201ENST00000439809 192 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 MTATP6P21-201ENST00000440681 189 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.639-201ENST00000458981 102 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.641-201ENST00000459414 105 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 U8.20-201ENST00000459445 131 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 RNU6-240P-201ENST00000516098 97 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 RNA5SP236-201ENST00000516169 116 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 RNU6-65P-201ENST00000516332 98 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 AC138907.4-201ENST00000570107 226 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 MIR4536-1-201ENST00000583537 88 ntBASIC-3.52□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 RNU6-832P-201ENST00000363319 107 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 RNU6-682P-201ENST00000363843 106 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 RNU6-458P-201ENST00000384179 107 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 RNU4-43P-201ENST00000410628 137 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 MTND4LP30-201ENST00000454092 297 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 RNU6-415P-201ENST00000516252 97 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 U6.58-201ENST00000613107 107 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 DLEU2_1.2-201ENST00000614667 120 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 AC107308.1-201ENST00000615897 301 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.53□□□□□ -2.97
CCDC58Q4VC31 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.54□□□□□ -2.98
CCDC58Q4VC31 RNU6-561P-201ENST00000516222 102 ntBASIC-3.54□□□□□ -2.98
CCDC58Q4VC31 RPS29P30-201ENST00000600975 111 ntBASIC-3.54□□□□□ -2.98
CCDC58Q4VC31 MIR6739-201ENST00000622461 75 ntBASIC-3.54□□□□□ -2.98
CCDC58Q4VC31 SNORD113-8-201ENST00000363497 74 ntBASIC-3.55□□□□□ -2.98
CCDC58Q4VC31 snoU2_19.4-201ENST00000364329 80 ntBASIC-3.55□□□□□ -2.98
CCDC58Q4VC31 RNU6-141P-201ENST00000410499 105 ntBASIC-3.55□□□□□ -2.98
CCDC58Q4VC31 AC015540.1-201ENST00000615828 501 ntBASIC-3.55□□□□□ -2.98
CCDC58Q4VC31 AL365265.1-201ENST00000621045 234 ntBASIC-3.55□□□□□ -2.98
CCDC58Q4VC31 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.56□□□□□ -2.98
CCDC58Q4VC31 Y_RNA.773-201ENST00000607168 90 ntBASIC-3.56□□□□□ -2.98
CCDC58Q4VC31 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.56□□□□□ -2.98
CCDC58Q4VC31 MIR4272-201ENST00000635924 64 ntBASIC-3.56□□□□□ -2.98
CCDC58Q4VC31 SNORD38.1-201ENST00000363863 68 ntBASIC-3.57□□□□□ -2.98
CCDC58Q4VC31 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.57□□□□□ -2.98
CCDC58Q4VC31 RNU6-976P-201ENST00000516086 111 ntBASIC-3.57□□□□□ -2.98
CCDC58Q4VC31 U6.97-201ENST00000636904 101 ntBASIC-3.57□□□□□ -2.98
CCDC58Q4VC31 MIR4773-1-201ENST00000637203 78 ntBASIC-3.57□□□□□ -2.98
CCDC58Q4VC31 RNU4-90P-201ENST00000362773 141 ntBASIC-3.58□□□□□ -2.98
CCDC58Q4VC31 RNU6-824P-201ENST00000363724 104 ntBASIC-3.58□□□□□ -2.98
CCDC58Q4VC31 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.58□□□□□ -2.98
CCDC58Q4VC31 Y_RNA.646-201ENST00000410980 101 ntBASIC-3.58□□□□□ -2.98
CCDC58Q4VC31 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.58□□□□□ -2.98
CCDC58Q4VC31 RNU6-62P-201ENST00000516526 102 ntBASIC-3.58□□□□□ -2.98
CCDC58Q4VC31 RNU6-890P-201ENST00000384121 107 ntBASIC-3.59□□□□□ -2.98
CCDC58Q4VC31 RNU7-85P-201ENST00000458851 63 ntBASIC-3.59□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 287.7 ms