Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
PCDH1Q08174 RNU7-104P-201ENST00000459398 79 ntBASIC1.42□□□□□ -2.18
PCDH1Q08174 AC004223.1-201ENST00000479840 271 ntBASIC1.42□□□□□ -2.18
PCDH1Q08174 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.42□□□□□ -2.18
PCDH1Q08174 Y_RNA.371-201ENST00000365591 113 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 RNU6-1126P-201ENST00000384002 107 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 RNU6-411P-201ENST00000384451 107 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PCDH1Q08174 U3.27-201ENST00000391237 200 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 MIR942-201ENST00000401111 86 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 MIR2113-201ENST00000459007 91 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 AC097510.1-201ENST00000510945 133 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 RNU6-135P-201ENST00000516769 101 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 MIR8070-201ENST00000616510 88 ntBASIC1.41□□□□□ -2.18
PCDH1Q08174 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.41□□□□□ -2.18
PCDH1Q08174 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
PCDH1Q08174 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
PCDH1Q08174 RNU6-340P-201ENST00000364005 107 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 MIR644A-201ENST00000385262 94 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 RNU2-59P-201ENST00000410482 191 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 SNORD124-201ENST00000459577 104 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.4□□□□□ -2.19
PCDH1Q08174 RNU6-523P-201ENST00000516304 54 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 Y_RNA.681-201ENST00000516445 113 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 MIR3920-201ENST00000581751 86 ntBASIC1.4□□□□□ -2.19
PCDH1Q08174 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PCDH1Q08174 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PCDH1Q08174 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
PCDH1Q08174 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
PCDH1Q08174 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
PCDH1Q08174 RNU6-469P-201ENST00000516253 101 ntBASIC1.39□□□□□ -2.19
PCDH1Q08174 RNU6-70P-201ENST00000516438 60 ntBASIC1.39□□□□□ -2.19
PCDH1Q08174 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
PCDH1Q08174 RNU6-681P-201ENST00000364012 104 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 Y_RNA.224-201ENST00000364308 111 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 MIR499A-201ENST00000384903 122 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 Y_RNA.606-201ENST00000410579 103 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 MIR548AG2-201ENST00000581228 64 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 AC067863.3-201ENST00000624172 122 ntBASIC1.38□□□□□ -2.19
PCDH1Q08174 Y_RNA.36-201ENST00000362602 112 ntBASIC1.37□□□□□ -2.19
PCDH1Q08174 Y_RNA.355-201ENST00000365462 98 ntBASIC1.37□□□□□ -2.19
PCDH1Q08174 RNU6-154P-201ENST00000384306 106 ntBASIC1.37□□□□□ -2.19
PCDH1Q08174 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
PCDH1Q08174 MIR4639-201ENST00000584938 69 ntBASIC1.37□□□□□ -2.19
PCDH1Q08174 U6.81-201ENST00000612550 106 ntBASIC1.37□□□□□ -2.19
PCDH1Q08174 RNU6-824P-201ENST00000363724 104 ntBASIC1.36□□□□□ -2.19
PCDH1Q08174 MIR617-201ENST00000385030 97 ntBASIC1.36□□□□□ -2.19
PCDH1Q08174 AC139453.2-201ENST00000487255 133 ntBASIC1.36□□□□□ -2.19
PCDH1Q08174 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
PCDH1Q08174 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 SNORD28-201ENST00000384706 75 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 MIR573-201ENST00000384964 99 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 MIR216B-201ENST00000390186 82 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 RNU6-1177P-201ENST00000391058 104 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 AC025627.3-201ENST00000582078 182 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 AC244669.1-204ENST00000621564 178 ntBASIC1.35□□□□□ -2.19
PCDH1Q08174 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 SNORA8.1-201ENST00000384250 140 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 RNA5SP404-201ENST00000517118 132 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 RNU6-1015P-201ENST00000517121 99 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 MIR664A-201ENST00000626086 82 ntBASIC1.34□□□□□ -2.19
PCDH1Q08174 RNU6-330P-201ENST00000363015 107 ntBASIC1.33□□□□□ -2.2
PCDH1Q08174 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
PCDH1Q08174 SNORD114-24-201ENST00000365029 72 ntBASIC1.33□□□□□ -2.2
PCDH1Q08174 RNU6-1335P-201ENST00000365426 107 ntBASIC1.33□□□□□ -2.2
PCDH1Q08174 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
PCDH1Q08174 MIR3612-201ENST00000579753 87 ntBASIC1.33□□□□□ -2.2
PCDH1Q08174 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
PCDH1Q08174 SNORD18A-201ENST00000363753 72 ntBASIC1.32□□□□□ -2.2
PCDH1Q08174 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
PCDH1Q08174 RNU6-871P-201ENST00000516122 100 ntBASIC1.32□□□□□ -2.2
PCDH1Q08174 RNU6-687P-201ENST00000516443 89 ntBASIC1.32□□□□□ -2.2
PCDH1Q08174 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
PCDH1Q08174 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
PCDH1Q08174 MIR519E-201ENST00000385075 84 ntBASIC1.31□□□□□ -2.2
PCDH1Q08174 RNU6-587P-201ENST00000391282 106 ntBASIC1.31□□□□□ -2.2
PCDH1Q08174 RNA5SP255-201ENST00000516370 107 ntBASIC1.31□□□□□ -2.2
PCDH1Q08174 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PCDH1Q08174 SNORD41.1-201ENST00000391000 69 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 MIR548L-201ENST00000408303 86 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
PCDH1Q08174 RNU7-74P-201ENST00000459104 62 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 MIR3678-201ENST00000578455 94 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PCDH1Q08174 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 MIR4773-1-201ENST00000637203 78 ntBASIC1.3□□□□□ -2.2
PCDH1Q08174 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
PCDH1Q08174 Y_RNA.258-201ENST00000364613 105 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms