Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 U7.2-201ENST00000607576 63 ntBASIC-0.6□□□□□ -2.51
SCN1BQ07699 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 RNU6-957P-201ENST00000363652 99 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 RNU6-811P-201ENST00000384069 107 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 MT-TY-201ENST00000387409 66 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 MIR4263-201ENST00000584745 83 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 FTX_2.1-201ENST00000618816 94 ntBASIC-0.61□□□□□ -2.51
SCN1BQ07699 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 RNU6-409P-201ENST00000384114 104 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.62□□□□□ -2.51
SCN1BQ07699 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 AL353621.2-201ENST00000605340 133 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 MIR4788-201ENST00000639104 80 ntBASIC-0.62□□□□□ -2.51
SCN1BQ07699 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.63□□□□□ -2.51
SCN1BQ07699 SNORD114-15-201ENST00000364687 72 ntBASIC-0.63□□□□□ -2.51
SCN1BQ07699 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.63□□□□□ -2.51
SCN1BQ07699 HAR1A.1-201ENST00000459583 118 ntBASIC-0.63□□□□□ -2.51
SCN1BQ07699 RNA5SP476-201ENST00000516613 103 ntBASIC-0.63□□□□□ -2.51
SCN1BQ07699 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.64□□□□□ -2.51
SCN1BQ07699 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
SCN1BQ07699 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.64□□□□□ -2.51
SCN1BQ07699 MIR3144-201ENST00000579460 79 ntBASIC-0.64□□□□□ -2.51
SCN1BQ07699 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 RNA5SP205-201ENST00000364653 136 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 MIR569-201ENST00000385228 96 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 RNU6-466P-201ENST00000391224 103 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.65□□□□□ -2.51
SCN1BQ07699 MIR655-201ENST00000362159 97 ntBASIC-0.66□□□□□ -2.52
SCN1BQ07699 MIR539-201ENST00000365690 78 ntBASIC-0.66□□□□□ -2.52
SCN1BQ07699 RNU6-284P-201ENST00000411105 106 ntBASIC-0.66□□□□□ -2.52
SCN1BQ07699 RNU6-175P-201ENST00000516896 107 ntBASIC-0.66□□□□□ -2.52
SCN1BQ07699 RNU6-235P-201ENST00000362644 107 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 RNY4P6-201ENST00000363667 96 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 MT-TQ-201ENST00000387372 72 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 RNU6-816P-201ENST00000390914 107 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 AC025166.1-201ENST00000612411 163 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 AL442128.1-201ENST00000615151 90 ntBASIC-0.67□□□□□ -2.52
SCN1BQ07699 SNORD101-201ENST00000384027 73 ntBASIC-0.68□□□□□ -2.52
SCN1BQ07699 AC007012.1-201ENST00000567192 175 ntBASIC-0.68□□□□□ -2.52
SCN1BQ07699 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.69□□□□□ -2.52
SCN1BQ07699 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.69□□□□□ -2.52
SCN1BQ07699 RNA5SP272-201ENST00000516095 111 ntBASIC-0.69□□□□□ -2.52
SCN1BQ07699 RNA5SP67-201ENST00000516422 131 ntBASIC-0.69□□□□□ -2.52
SCN1BQ07699 RNU6-182P-201ENST00000516970 105 ntBASIC-0.69□□□□□ -2.52
SCN1BQ07699 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.69□□□□□ -2.52
SCN1BQ07699 AC096720.1-201ENST00000604441 183 ntBASIC-0.69□□□□□ -2.52
SCN1BQ07699 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.7□□□□□ -2.52
SCN1BQ07699 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.7□□□□□ -2.52
SCN1BQ07699 AL391099.1-201ENST00000624635 187 ntBASIC-0.7□□□□□ -2.52
SCN1BQ07699 SNORD58C-201ENST00000365223 64 ntBASIC-0.71□□□□□ -2.52
SCN1BQ07699 snoU13.11-201ENST00000459219 104 ntBASIC-0.71□□□□□ -2.52
SCN1BQ07699 MTND5P18-201ENST00000445624 1801 ntBASIC-0.71□□□□□ -2.52
SCN1BQ07699 RNU6-455P-201ENST00000384681 107 ntBASIC-0.72□□□□□ -2.52
SCN1BQ07699 AC114755.3-201ENST00000481111 251 ntBASIC-0.72□□□□□ -2.52
SCN1BQ07699 RNU6-426P-201ENST00000516464 97 ntBASIC-0.72□□□□□ -2.52
SCN1BQ07699 MTND5P41-201ENST00000517498 206 ntBASIC-0.72□□□□□ -2.52
SCN1BQ07699 MIR4696-201ENST00000581431 70 ntBASIC-0.72□□□□□ -2.52
SCN1BQ07699 AL590491.3-201ENST00000610731 82 ntBASIC-0.72□□□□□ -2.52
SCN1BQ07699 MIR20A-201ENST00000362279 71 ntBASIC-0.73□□□□□ -2.53
SCN1BQ07699 RNU6-664P-201ENST00000362381 107 ntBASIC-0.73□□□□□ -2.53
SCN1BQ07699 SNORD114-11-201ENST00000363738 75 ntBASIC-0.73□□□□□ -2.53
SCN1BQ07699 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.73□□□□□ -2.53
SCN1BQ07699 MIR652-201ENST00000385278 98 ntBASIC-0.73□□□□□ -2.53
SCN1BQ07699 MIR548AX-201ENST00000580117 73 ntBASIC-0.73□□□□□ -2.53
SCN1BQ07699 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.74□□□□□ -2.53
SCN1BQ07699 RNU6-480P-201ENST00000384332 107 ntBASIC-0.74□□□□□ -2.53
SCN1BQ07699 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.74□□□□□ -2.53
SCN1BQ07699 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
SCN1BQ07699 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.75□□□□□ -2.53
SCN1BQ07699 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.75□□□□□ -2.53
SCN1BQ07699 MIR216B-201ENST00000390186 82 ntBASIC-0.75□□□□□ -2.53
SCN1BQ07699 RNU6-935P-201ENST00000410371 100 ntBASIC-0.75□□□□□ -2.53
SCN1BQ07699 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
SCN1BQ07699 MIR4432-201ENST00000581823 84 ntBASIC-0.76□□□□□ -2.53
SCN1BQ07699 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.77□□□□□ -2.53
SCN1BQ07699 RNU6-886P-201ENST00000384319 105 ntBASIC-0.77□□□□□ -2.53
SCN1BQ07699 AC244090.1-201ENST00000441884 93 ntBASIC-0.77□□□□□ -2.53
SCN1BQ07699 AP000676.1-201ENST00000533307 52 ntBASIC-0.77□□□□□ -2.53
SCN1BQ07699 MIR548O2-201ENST00000616090 70 ntBASIC-0.77□□□□□ -2.53
SCN1BQ07699 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.79□□□□□ -2.54
SCN1BQ07699 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.79□□□□□ -2.54
SCN1BQ07699 RNA5SP66-201ENST00000517178 101 ntBASIC-0.79□□□□□ -2.54
SCN1BQ07699 MIR4436A-201ENST00000585278 85 ntBASIC-0.79□□□□□ -2.54
SCN1BQ07699 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.8□□□□□ -2.54
SCN1BQ07699 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.8□□□□□ -2.54
SCN1BQ07699 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.8□□□□□ -2.54
SCN1BQ07699 MIR451A-201ENST00000385059 72 ntBASIC-0.8□□□□□ -2.54
SCN1BQ07699 MIR577-201ENST00000385196 96 ntBASIC-0.8□□□□□ -2.54
SCN1BQ07699 MTND4LP9-201ENST00000427694 174 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 300.2 ms