Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU7-106P-201ENST00000459514 67 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MTATP6P25-201ENST00000574491 261 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 AC006254.2-201ENST00000603259 279 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR6888-201ENST00000621977 67 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR1255B1-201ENST00000636325 63 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR379-201ENST00000362218 67 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 RNU6-681P-201ENST00000364012 104 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 RNU6-382P-201ENST00000365181 106 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 RNU6-132P-201ENST00000383863 107 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 RNU6-524P-201ENST00000384270 107 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 MIR34C-201ENST00000384831 77 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 MIR487B-201ENST00000385021 84 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.41□□□□□ -2.47
COL7A1Q02388 SNORA69.1-201ENST00000390904 137 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 ELOCP20-201ENST00000422460 345 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.41□□□□□ -2.47
COL7A1Q02388 FGF7P6-202ENST00000451282 293 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 SNRPGP8-201ENST00000454064 226 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.41□□□□□ -2.47
COL7A1Q02388 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AP002392.1-201ENST00000537692 208 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 CYP3A54P-201ENST00000566950 75 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 MIR3657-201ENST00000584818 117 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AC005520.4-201ENST00000604337 90 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AC084781.2-201ENST00000615568 161 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AC022079.1-201ENST00000621546 602 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 AC138305.3-201ENST00000624988 240 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 MIR4272-201ENST00000635924 64 ntBASIC-0.41□□□□□ -2.47
COL7A1Q02388 MIR367-201ENST00000362299 68 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 SNORD115-33-201ENST00000363723 82 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 SNORD50.2-201ENST00000365465 70 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-246P-201ENST00000384702 107 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 MIR548U-201ENST00000390728 81 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-460P-201ENST00000391158 108 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 AF228730.3-201ENST00000436691 102 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 AC082651.2-201ENST00000496833 166 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 MIR548AM-201ENST00000584298 74 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-508P-201ENST00000363231 103 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-340P-201ENST00000364005 107 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 SNORD81.2-201ENST00000365153 76 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-662P-201ENST00000384253 104 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 SNORD116-6-201ENST00000384711 96 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 MIR616-201ENST00000385293 97 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU7-61P-201ENST00000515897 61 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-720P-201ENST00000516363 108 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-764P-201ENST00000516396 105 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNY4P20-201ENST00000516678 93 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 RNU7-4P-201ENST00000516961 62 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 MIR3140-201ENST00000583685 90 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 TRDV1-202ENST00000621643 102 ntBASIC-0.41□□□□□ -2.48
COL7A1Q02388 SNORA25.1-201ENST00000362326 128 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 SNORD113-8-201ENST00000363497 74 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 SNORA62.4-201ENST00000365504 151 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-258P-201ENST00000390884 101 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Z83846.1-201ENST00000446798 265 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 snoU13.17-201ENST00000458802 104 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 snoU13.10-201ENST00000459301 103 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-307P-201ENST00000516743 106 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-264P-201ENST00000517134 104 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 AL513043.2-201ENST00000573941 143 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 MIR3613-201ENST00000579844 87 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 AC080013.6-201ENST00000606185 215 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 AC002553.4-201ENST00000616896 331 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 SNORA63.7-201ENST00000365579 123 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-409P-201ENST00000384114 104 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-987P-201ENST00000384759 104 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 MIR548A1-201ENST00000385041 97 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 MIR559-201ENST00000385188 96 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 AL078595.1-201ENST00000404458 226 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 MIR548G-201ENST00000408442 89 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 MTND1P29-201ENST00000448112 647 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 AL121914.1-201ENST00000450188 156 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 MIR3064-201ENST00000581130 66 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.42□□□□□ -2.48
COL7A1Q02388 AC092794.1-201ENST00000612734 582 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms