Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL512360.1-201ENST00000555346 234 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 MIR548AG1-201ENST00000579932 66 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-211P-201ENST00000384047 107 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 MIR548F5-201ENST00000408421 86 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 AC073869.6-201ENST00000640656 341 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 SNORD4B-201ENST00000459083 72 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 MIR548W-201ENST00000581970 74 ntBASIC-1.72□□□□□ -2.69
PRKDCP78527 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 AL021921.1-201ENST00000442774 93 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 RNU7-66P-201ENST00000459469 62 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 RNU6-845P-201ENST00000362578 103 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 MIR34C-201ENST00000384831 77 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 snoU13.17-201ENST00000458802 104 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 AC124864.2-201ENST00000624736 186 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 MIR548A1-201ENST00000385041 97 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 SEPT14P3-201ENST00000439401 183 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 AL732372.2-207ENST00000445840 183 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 SEPT14P2-201ENST00000453405 183 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 RNU6-75P-201ENST00000515944 104 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 RNU6-311P-201ENST00000516224 102 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 FO082796.1-201ENST00000523795 183 ntBASIC-1.73□□□□□ -2.69
PRKDCP78527 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 RNU6-358P-201ENST00000516564 75 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 AC093424.1-201ENST00000604999 338 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 RNU4-43P-201ENST00000410628 137 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 MIR5701-3-201ENST00000578890 82 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 MIR5701-1-201ENST00000585138 82 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 AC005520.4-201ENST00000604337 90 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 MIR5701-2-201ENST00000615634 82 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 SNORD38.1-201ENST00000363863 68 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 SNORA7.5-201ENST00000410672 110 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.74□□□□□ -2.69
PRKDCP78527 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 U6.106-201ENST00000636360 105 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 RNU5F-1-201ENST00000362507 117 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 RNU6-382P-201ENST00000365181 106 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 MTND1P1-201ENST00000445453 368 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.75□□□□□ -2.69
PRKDCP78527 RNU6-643P-201ENST00000384018 107 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 MTND4LP1-201ENST00000446263 157 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 MIR3646-201ENST00000578301 84 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 RNU6-990P-201ENST00000364385 104 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 MIR3140-201ENST00000583685 90 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 RNU6-103P-201ENST00000363686 107 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 AC082651.2-201ENST00000496833 166 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 RNA5SP236-201ENST00000516169 116 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 SNORD116-25-201ENST00000516517 92 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 MTATP6P25-201ENST00000574491 261 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 RNU6-518P-201ENST00000516056 96 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 AC020661.2-201ENST00000560114 134 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.76□□□□□ -2.69
PRKDCP78527 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 MIR3657-201ENST00000584818 117 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 MIR376A1-201ENST00000616574 68 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 SNORD114-13-201ENST00000364377 74 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.77□□□□□ -2.69
PRKDCP78527 RNY4P25-201ENST00000459254 96 ntBASIC-1.77□□□□□ -2.69
PRKDCP78527 SNORD113-8-201ENST00000363497 74 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 RNU6-62P-201ENST00000516526 102 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 AL132765.2-201ENST00000610812 351 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 RNU6-651P-201ENST00000411040 105 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 MIR3915-201ENST00000578518 97 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 MIR429-201ENST00000362106 83 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 RNU6-120P-201ENST00000516077 103 ntBASIC-1.78□□□□□ -2.69
PRKDCP78527 RNU6-694P-201ENST00000364071 147 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 RNU6-608P-201ENST00000383927 104 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 RNU7-6P-201ENST00000516845 62 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 SNORD18B-201ENST00000365659 72 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 AC099799.1-201ENST00000439809 192 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 AL121914.1-201ENST00000450188 156 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 AL050303.3-201ENST00000613704 284 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 RNU6-247P-201ENST00000362636 107 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.79□□□□□ -2.7
PRKDCP78527 RNU6-824P-201ENST00000363724 104 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 RNU6-297P-201ENST00000384636 107 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 AL442128.1-201ENST00000615151 90 ntBASIC-1.8□□□□□ -2.7
PRKDCP78527 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms