Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SNORD116-17-201ENST00000383929 92 ntBASIC-0.11□□□□□ -2.43
PEX3P56589 SNORD116-15-201ENST00000384445 92 ntBASIC-0.11□□□□□ -2.43
PEX3P56589 SNORD116-19-201ENST00000384729 92 ntBASIC-0.11□□□□□ -2.43
PEX3P56589 SNORA75.1-201ENST00000391130 148 ntBASIC-0.11□□□□□ -2.43
PEX3P56589 AC068339.1-201ENST00000526965 141 ntBASIC-0.11□□□□□ -2.43
PEX3P56589 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.12□□□□□ -2.43
PEX3P56589 U8.6-201ENST00000364939 135 ntBASIC-0.12□□□□□ -2.43
PEX3P56589 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.12□□□□□ -2.43
PEX3P56589 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.12□□□□□ -2.43
PEX3P56589 AL109933.3-201ENST00000619095 188 ntBASIC-0.12□□□□□ -2.43
PEX3P56589 RNU6-774P-201ENST00000363238 107 ntBASIC-0.13□□□□□ -2.43
PEX3P56589 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
PEX3P56589 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
PEX3P56589 AC096720.1-201ENST00000604441 183 ntBASIC-0.13□□□□□ -2.43
PEX3P56589 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 MIR181B2-201ENST00000385004 89 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 MT-TY-201ENST00000387409 66 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 snoU13.11-201ENST00000459219 104 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 RNU6-75P-201ENST00000515944 104 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 MIR5009-201ENST00000578736 100 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.14□□□□□ -2.43
PEX3P56589 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 RNU6-480P-201ENST00000384332 107 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 MIR106A-201ENST00000384870 81 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 MIR548A1-201ENST00000385041 97 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 RNU6-466P-201ENST00000391224 103 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 MIR4696-201ENST00000581431 70 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 AL670379.3-201ENST00000605040 251 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.15□□□□□ -2.43
PEX3P56589 RNA5SP457-201ENST00000363657 124 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 MIR516B1-201ENST00000385211 90 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 AC109327.2-201ENST00000448339 378 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 CR383656.4-201ENST00000546909 122 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 MIR548AE1-201ENST00000583292 70 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 MIR4439-201ENST00000583746 80 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 AC025521.1-201ENST00000621624 286 ntBASIC-0.16□□□□□ -2.44
PEX3P56589 MIR148A-201ENST00000362215 68 ntBASIC-0.17□□□□□ -2.44
PEX3P56589 RNU6-664P-201ENST00000362381 107 ntBASIC-0.17□□□□□ -2.44
PEX3P56589 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.17□□□□□ -2.44
PEX3P56589 MIR548A3-201ENST00000385297 97 ntBASIC-0.17□□□□□ -2.44
PEX3P56589 YWHAEP2-201ENST00000580066 112 ntBASIC-0.17□□□□□ -2.44
PEX3P56589 MIR4473-201ENST00000583731 91 ntBASIC-0.17□□□□□ -2.44
PEX3P56589 SNORD101-201ENST00000384027 73 ntBASIC-0.18□□□□□ -2.44
PEX3P56589 RNU6V-201ENST00000384105 107 ntBASIC-0.18□□□□□ -2.44
PEX3P56589 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.18□□□□□ -2.44
PEX3P56589 MIR4460-201ENST00000577862 86 ntBASIC-0.18□□□□□ -2.44
PEX3P56589 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.18□□□□□ -2.44
PEX3P56589 AC084368.1-201ENST00000620935 65 ntBASIC-0.18□□□□□ -2.44
PEX3P56589 MIR6514-201ENST00000622549 70 ntBASIC-0.18□□□□□ -2.44
PEX3P56589 RNU6-81P-201ENST00000365608 104 ntBASIC-0.19□□□□□ -2.44
PEX3P56589 RNU6-959P-201ENST00000384671 107 ntBASIC-0.19□□□□□ -2.44
PEX3P56589 AC104692.1-201ENST00000472406 90 ntBASIC-0.19□□□□□ -2.44
PEX3P56589 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.19□□□□□ -2.44
PEX3P56589 RNU6-86P-201ENST00000606534 107 ntBASIC-0.19□□□□□ -2.44
PEX3P56589 RN7SL660P-201ENST00000614852 299 ntBASIC-0.19□□□□□ -2.44
PEX3P56589 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.19□□□□□ -2.44
PEX3P56589 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.2□□□□□ -2.44
PEX3P56589 RNU6-880P-201ENST00000384526 107 ntBASIC-0.2□□□□□ -2.44
PEX3P56589 RNU7-85P-201ENST00000458851 63 ntBASIC-0.2□□□□□ -2.44
PEX3P56589 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.2□□□□□ -2.44
PEX3P56589 AL513043.2-201ENST00000573941 143 ntBASIC-0.2□□□□□ -2.44
PEX3P56589 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
PEX3P56589 SNORD45B-201ENST00000364617 72 ntBASIC-0.21□□□□□ -2.44
PEX3P56589 RNU6-935P-201ENST00000410371 100 ntBASIC-0.21□□□□□ -2.44
PEX3P56589 RNU7-188P-201ENST00000517063 64 ntBASIC-0.21□□□□□ -2.44
PEX3P56589 MIR548O2-201ENST00000616090 70 ntBASIC-0.21□□□□□ -2.44
PEX3P56589 RNU6-46P-201ENST00000383860 107 ntBASIC-0.22□□□□□ -2.44
PEX3P56589 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.22□□□□□ -2.44
PEX3P56589 RNU6-175P-201ENST00000516896 107 ntBASIC-0.22□□□□□ -2.44
PEX3P56589 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.23□□□□□ -2.45
PEX3P56589 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.23□□□□□ -2.45
PEX3P56589 MIR4777-201ENST00000583710 86 ntBASIC-0.23□□□□□ -2.45
PEX3P56589 uc_338.10-201ENST00000621872 182 ntBASIC-0.23□□□□□ -2.45
PEX3P56589 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.24□□□□□ -2.45
PEX3P56589 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.24□□□□□ -2.45
PEX3P56589 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.24□□□□□ -2.45
PEX3P56589 SNORD116-21-201ENST00000384507 92 ntBASIC-0.24□□□□□ -2.45
PEX3P56589 RNU6-813P-201ENST00000384691 107 ntBASIC-0.24□□□□□ -2.45
PEX3P56589 MIR216B-201ENST00000390186 82 ntBASIC-0.24□□□□□ -2.45
PEX3P56589 RNU6-644P-201ENST00000391155 98 ntBASIC-0.25□□□□□ -2.45
PEX3P56589 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.25□□□□□ -2.45
PEX3P56589 RNU6-904P-201ENST00000516206 101 ntBASIC-0.25□□□□□ -2.45
PEX3P56589 MIR548Z-201ENST00000584743 97 ntBASIC-0.25□□□□□ -2.45
PEX3P56589 MIR655-201ENST00000362159 97 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 SNORA18.1-201ENST00000363418 128 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 RNU6-154P-201ENST00000384306 106 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 AC008267.6-201ENST00000441664 139 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 AC103810.7-201ENST00000607821 91 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 MIR6507-201ENST00000613630 70 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 AC012531.4-201ENST00000616509 177 ntBASIC-0.26□□□□□ -2.45
PEX3P56589 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.26□□□□□ -2.45
PEX3P56589 SNORD114-29-201ENST00000364819 70 ntBASIC-0.27□□□□□ -2.45
PEX3P56589 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms