Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 RNU6-1124P-201ENST00000384169 107 ntBASIC0.88□□□□□ -2.27
TTC3P53804 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC3P53804 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.88□□□□□ -2.27
TTC3P53804 RNU6-726P-201ENST00000364680 107 ntBASIC0.87□□□□□ -2.27
TTC3P53804 Y_RNA.283-201ENST00000364798 112 ntBASIC0.87□□□□□ -2.27
TTC3P53804 RNU6-811P-201ENST00000384069 107 ntBASIC0.87□□□□□ -2.27
TTC3P53804 MIR100-201ENST00000385259 80 ntBASIC0.87□□□□□ -2.27
TTC3P53804 RNU6-466P-201ENST00000391224 103 ntBASIC0.87□□□□□ -2.27
TTC3P53804 MIR936-201ENST00000401264 98 ntBASIC0.87□□□□□ -2.27
TTC3P53804 RNU6-135P-201ENST00000516769 101 ntBASIC0.87□□□□□ -2.27
TTC3P53804 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
TTC3P53804 AL162376.1-201ENST00000624117 175 ntBASIC0.87□□□□□ -2.27
TTC3P53804 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
TTC3P53804 Y_RNA.219-201ENST00000364232 113 ntBASIC0.86□□□□□ -2.27
TTC3P53804 RNU6-1110P-201ENST00000516462 101 ntBASIC0.86□□□□□ -2.27
TTC3P53804 MIR4796-201ENST00000580742 81 ntBASIC0.86□□□□□ -2.27
TTC3P53804 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.86□□□□□ -2.27
TTC3P53804 RNA5SP245-201ENST00000364239 121 ntBASIC0.86□□□□□ -2.27
TTC3P53804 RNU6-939P-201ENST00000384634 107 ntBASIC0.86□□□□□ -2.27
TTC3P53804 AC244505.6-201ENST00000452829 130 ntBASIC0.86□□□□□ -2.27
TTC3P53804 MIR4676-201ENST00000583078 72 ntBASIC0.86□□□□□ -2.27
TTC3P53804 AC244098.3-201ENST00000424803 96 ntBASIC0.85□□□□□ -2.27
TTC3P53804 snoU13.17-201ENST00000458802 104 ntBASIC0.85□□□□□ -2.27
TTC3P53804 RNU6-1057P-201ENST00000517162 102 ntBASIC0.85□□□□□ -2.27
TTC3P53804 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.85□□□□□ -2.27
TTC3P53804 RN7SL793P-201ENST00000583259 296 ntBASIC0.85□□□□□ -2.27
TTC3P53804 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
TTC3P53804 MIR26B-201ENST00000362251 77 ntBASIC0.84□□□□□ -2.27
TTC3P53804 RNA5SP327-201ENST00000362494 101 ntBASIC0.84□□□□□ -2.27
TTC3P53804 MIR573-201ENST00000384964 99 ntBASIC0.84□□□□□ -2.27
TTC3P53804 SNORD100-201ENST00000408573 76 ntBASIC0.84□□□□□ -2.27
TTC3P53804 MIR548BB-201ENST00000626714 66 ntBASIC0.84□□□□□ -2.27
TTC3P53804 AC010487.4-201ENST00000637027 61 ntBASIC0.84□□□□□ -2.27
TTC3P53804 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.28
TTC3P53804 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.28
TTC3P53804 MIR4639-201ENST00000584938 69 ntBASIC0.84□□□□□ -2.28
TTC3P53804 SNORA63.2-201ENST00000362603 126 ntBASIC0.83□□□□□ -2.28
TTC3P53804 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
TTC3P53804 MIR216B-201ENST00000390186 82 ntBASIC0.83□□□□□ -2.28
TTC3P53804 AC002429.1-201ENST00000437672 148 ntBASIC0.83□□□□□ -2.28
TTC3P53804 SNORA25.13-201ENST00000516395 103 ntBASIC0.83□□□□□ -2.28
TTC3P53804 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TTC3P53804 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.83□□□□□ -2.28
TTC3P53804 SNORD101-201ENST00000384027 73 ntBASIC0.82□□□□□ -2.28
TTC3P53804 MIR518A1-201ENST00000385068 85 ntBASIC0.82□□□□□ -2.28
TTC3P53804 MIR599-201ENST00000385069 95 ntBASIC0.82□□□□□ -2.28
TTC3P53804 MIR6513-201ENST00000621188 64 ntBASIC0.82□□□□□ -2.28
TTC3P53804 SNORD114-24-201ENST00000365029 72 ntBASIC0.82□□□□□ -2.28
TTC3P53804 RNU6-1335P-201ENST00000365426 107 ntBASIC0.82□□□□□ -2.28
TTC3P53804 RNU6-402P-201ENST00000410678 103 ntBASIC0.82□□□□□ -2.28
TTC3P53804 RNU6-1052P-201ENST00000411398 104 ntBASIC0.82□□□□□ -2.28
TTC3P53804 SCARNA18B-201ENST00000458806 135 ntBASIC0.82□□□□□ -2.28
TTC3P53804 Y_RNA.809-201ENST00000516058 95 ntBASIC0.82□□□□□ -2.28
TTC3P53804 SNORA18.5-201ENST00000516616 101 ntBASIC0.82□□□□□ -2.28
TTC3P53804 RNU6-719P-201ENST00000516671 104 ntBASIC0.82□□□□□ -2.28
TTC3P53804 MIR4696-201ENST00000581431 70 ntBASIC0.82□□□□□ -2.28
TTC3P53804 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
TTC3P53804 Y_RNA.426-201ENST00000384068 113 ntBASIC0.81□□□□□ -2.28
TTC3P53804 MIR1297-201ENST00000637311 77 ntBASIC0.81□□□□□ -2.28
TTC3P53804 Y_RNA.207-201ENST00000364142 106 ntBASIC0.81□□□□□ -2.28
TTC3P53804 Y_RNA.371-201ENST00000365591 113 ntBASIC0.81□□□□□ -2.28
TTC3P53804 AC067940.1-201ENST00000458411 300 ntBASIC0.81□□□□□ -2.28
TTC3P53804 RNU7-153P-201ENST00000516455 62 ntBASIC0.81□□□□□ -2.28
TTC3P53804 RNU6-161P-201ENST00000363051 106 ntBASIC0.8□□□□□ -2.28
TTC3P53804 RNA5SP117-201ENST00000365294 118 ntBASIC0.8□□□□□ -2.28
TTC3P53804 SNORD28-201ENST00000384706 75 ntBASIC0.8□□□□□ -2.28
TTC3P53804 RNU6-469P-201ENST00000516253 101 ntBASIC0.8□□□□□ -2.28
TTC3P53804 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
TTC3P53804 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TTC3P53804 SNORD114-23-201ENST00000363536 72 ntBASIC0.79□□□□□ -2.28
TTC3P53804 YWHAEP2-201ENST00000580066 112 ntBASIC0.79□□□□□ -2.28
TTC3P53804 YWHAEP3-201ENST00000582767 121 ntBASIC0.79□□□□□ -2.28
TTC3P53804 RNU6-681P-201ENST00000364012 104 ntBASIC0.79□□□□□ -2.28
TTC3P53804 RNU6-857P-201ENST00000515893 110 ntBASIC0.79□□□□□ -2.28
TTC3P53804 AC019288.1-201ENST00000557918 224 ntBASIC0.79□□□□□ -2.28
TTC3P53804 MIR18A-201ENST00000362310 71 ntBASIC0.78□□□□□ -2.28
TTC3P53804 AC093729.1-201ENST00000513074 128 ntBASIC0.78□□□□□ -2.28
TTC3P53804 MIR3064-201ENST00000581130 66 ntBASIC0.78□□□□□ -2.28
TTC3P53804 RNU6-1126P-201ENST00000384002 107 ntBASIC0.77□□□□□ -2.29
TTC3P53804 RNA5SP225-201ENST00000410874 135 ntBASIC0.77□□□□□ -2.29
TTC3P53804 AL450471.1-201ENST00000447509 127 ntBASIC0.77□□□□□ -2.29
TTC3P53804 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.77□□□□□ -2.29
TTC3P53804 TRDV1-202ENST00000621643 102 ntBASIC0.77□□□□□ -2.29
TTC3P53804 RNU6-1051P-201ENST00000365471 102 ntBASIC0.76□□□□□ -2.29
TTC3P53804 MTRNR2L2-201ENST00000604882 87 ntBASIC0.76□□□□□ -2.29
TTC3P53804 RNU5F-1-201ENST00000362507 117 ntBASIC0.76□□□□□ -2.29
TTC3P53804 Y_RNA.94-201ENST00000363068 106 ntBASIC0.76□□□□□ -2.29
TTC3P53804 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TTC3P53804 MIR216A-201ENST00000385063 110 ntBASIC0.76□□□□□ -2.29
TTC3P53804 MIR548L-201ENST00000408303 86 ntBASIC0.76□□□□□ -2.29
TTC3P53804 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
TTC3P53804 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
TTC3P53804 AC011195.1-201ENST00000578177 177 ntBASIC0.76□□□□□ -2.29
TTC3P53804 SNORD18A-201ENST00000363753 72 ntBASIC0.75□□□□□ -2.29
TTC3P53804 Y_RNA.258-201ENST00000364613 105 ntBASIC0.75□□□□□ -2.29
TTC3P53804 RNU6-287P-201ENST00000516230 98 ntBASIC0.75□□□□□ -2.29
TTC3P53804 AC073869.9-201ENST00000641610 120 ntBASIC0.75□□□□□ -2.29
TTC3P53804 RNU6-291P-201ENST00000384720 107 ntBASIC0.74□□□□□ -2.29
TTC3P53804 MIR451A-201ENST00000385059 72 ntBASIC0.74□□□□□ -2.29
TTC3P53804 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 261 ms