Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 snoU13.26-201ENST00000459452 105 ntBASIC1.79□□□□□ -2.12
RNF144AP50876 RNU6-902P-201ENST00000517212 91 ntBASIC1.79□□□□□ -2.12
RNF144AP50876 AC067863.3-201ENST00000624172 122 ntBASIC1.79□□□□□ -2.12
RNF144AP50876 MIR6715A-201ENST00000615929 79 ntBASIC1.78□□□□□ -2.12
RNF144AP50876 MIR548O2-201ENST00000616090 70 ntBASIC1.78□□□□□ -2.12
RNF144AP50876 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
RNF144AP50876 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RNF144AP50876 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 MIR519E-201ENST00000385075 84 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 MIR1827-201ENST00000408549 66 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RNF144AP50876 SNORA70.22-201ENST00000517160 124 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 MIR4781-201ENST00000585250 76 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 AL136317.1-201ENST00000612653 226 ntBASIC1.77□□□□□ -2.13
RNF144AP50876 RNA5SP117-201ENST00000365294 118 ntBASIC1.76□□□□□ -2.13
RNF144AP50876 RNU6-54P-201ENST00000365563 107 ntBASIC1.76□□□□□ -2.13
RNF144AP50876 RMST_2.1-201ENST00000617263 136 ntBASIC1.76□□□□□ -2.13
RNF144AP50876 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
RNF144AP50876 RNU1-123P-201ENST00000458950 160 ntBASIC1.75□□□□□ -2.13
RNF144AP50876 AC073869.9-201ENST00000641610 120 ntBASIC1.75□□□□□ -2.13
RNF144AP50876 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RNF144AP50876 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.75□□□□□ -2.13
RNF144AP50876 RNU6-669P-201ENST00000365575 107 ntBASIC1.74□□□□□ -2.13
RNF144AP50876 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.74□□□□□ -2.13
RNF144AP50876 MIR633-201ENST00000384821 98 ntBASIC1.73□□□□□ -2.13
RNF144AP50876 MIR504-201ENST00000385065 83 ntBASIC1.73□□□□□ -2.13
RNF144AP50876 MIR644A-201ENST00000385262 94 ntBASIC1.73□□□□□ -2.13
RNF144AP50876 MIR3657-201ENST00000584818 117 ntBASIC1.73□□□□□ -2.13
RNF144AP50876 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RNF144AP50876 RNU6-260P-201ENST00000384092 107 ntBASIC1.72□□□□□ -2.13
RNF144AP50876 RNU6V-201ENST00000384105 107 ntBASIC1.72□□□□□ -2.13
RNF144AP50876 RNU7-74P-201ENST00000459104 62 ntBASIC1.72□□□□□ -2.13
RNF144AP50876 RNU6-542P-201ENST00000516405 103 ntBASIC1.72□□□□□ -2.13
RNF144AP50876 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
RNF144AP50876 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
RNF144AP50876 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
RNF144AP50876 MIR222-201ENST00000384992 110 ntBASIC1.71□□□□□ -2.14
RNF144AP50876 AC002350.1-201ENST00000490759 375 ntBASIC1.71□□□□□ -2.14
RNF144AP50876 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
RNF144AP50876 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
RNF144AP50876 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
RNF144AP50876 RNU6-645P-201ENST00000364649 106 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 RNU6-614P-201ENST00000384369 107 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 SNORD12-201ENST00000391002 90 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 MIR548L-201ENST00000408303 86 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 RNU6-469P-201ENST00000516253 101 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 RNU6-135P-201ENST00000516769 101 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 U6.59-201ENST00000615686 107 ntBASIC1.7□□□□□ -2.14
RNF144AP50876 Y_RNA.375-201ENST00000365625 101 ntBASIC1.69□□□□□ -2.14
RNF144AP50876 MIR7-2-201ENST00000384970 110 ntBASIC1.69□□□□□ -2.14
RNF144AP50876 SNORD42B-201ENST00000458893 67 ntBASIC1.69□□□□□ -2.14
RNF144AP50876 AC244669.1-204ENST00000621564 178 ntBASIC1.69□□□□□ -2.14
RNF144AP50876 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
RNF144AP50876 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
RNF144AP50876 AC002429.1-201ENST00000437672 148 ntBASIC1.68□□□□□ -2.14
RNF144AP50876 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
RNF144AP50876 MIR4639-201ENST00000584938 69 ntBASIC1.68□□□□□ -2.14
RNF144AP50876 AC092634.7-201ENST00000621022 103 ntBASIC1.68□□□□□ -2.14
RNF144AP50876 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF144AP50876 MIR1289-2-201ENST00000408360 111 ntBASIC1.67□□□□□ -2.14
RNF144AP50876 AC079150.2-201ENST00000443733 78 ntBASIC1.67□□□□□ -2.14
RNF144AP50876 snoU13.23-201ENST00000458863 104 ntBASIC1.67□□□□□ -2.14
RNF144AP50876 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.67□□□□□ -2.14
RNF144AP50876 MIR7843-201ENST00000622274 79 ntBASIC1.67□□□□□ -2.14
RNF144AP50876 SNORD28-201ENST00000384706 75 ntBASIC1.66□□□□□ -2.14
RNF144AP50876 SNORD89-201ENST00000390981 114 ntBASIC1.66□□□□□ -2.14
RNF144AP50876 RNU6-141P-201ENST00000410499 105 ntBASIC1.66□□□□□ -2.14
RNF144AP50876 RNA5SP147-201ENST00000516493 109 ntBASIC1.66□□□□□ -2.14
RNF144AP50876 MIR4460-201ENST00000577862 86 ntBASIC1.66□□□□□ -2.14
RNF144AP50876 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
RNF144AP50876 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
RNF144AP50876 SNORD41.1-201ENST00000391000 69 ntBASIC1.65□□□□□ -2.15
RNF144AP50876 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
RNF144AP50876 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
RNF144AP50876 SNORA2.1-201ENST00000363089 137 ntBASIC1.64□□□□□ -2.15
RNF144AP50876 MT-TY-201ENST00000387409 66 ntBASIC1.64□□□□□ -2.15
RNF144AP50876 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
RNF144AP50876 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RNF144AP50876 SNORA25.5-201ENST00000363782 126 ntBASIC1.63□□□□□ -2.15
RNF144AP50876 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
RNF144AP50876 MIR6845-201ENST00000613182 61 ntBASIC1.63□□□□□ -2.15
RNF144AP50876 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RNF144AP50876 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RNF144AP50876 RNU6-990P-201ENST00000364385 104 ntBASIC1.62□□□□□ -2.15
RNF144AP50876 RNU6-1110P-201ENST00000516462 101 ntBASIC1.62□□□□□ -2.15
RNF144AP50876 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
RNF144AP50876 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RNF144AP50876 RNA5SP192-201ENST00000364404 120 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 SNORD105-201ENST00000386910 85 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 RNU6-237P-201ENST00000515985 71 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 MIR466-201ENST00000580653 84 ntBASIC1.61□□□□□ -2.15
RNF144AP50876 RNU6-940P-201ENST00000363433 104 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 RNU6-726P-201ENST00000364680 107 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 RNU6-1335P-201ENST00000365426 107 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 RNU6-716P-201ENST00000365621 103 ntBASIC1.6□□□□□ -2.15
RNF144AP50876 SNORA25-201ENST00000384384 134 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms