Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-509P-201ENST00000363519 107 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 RNU6-30P-201ENST00000384561 107 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 MIR181B2-201ENST00000385004 89 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 MIR617-201ENST00000385030 97 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 AC069271.1-201ENST00000445577 156 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 RNU7-104P-201ENST00000459398 79 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 Y_RNA.659-201ENST00000515994 113 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 MIR4752-201ENST00000579672 72 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 RNU6-86P-201ENST00000606534 107 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 uc_338.28-201ENST00000612082 187 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 MIR6755-201ENST00000619993 66 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 U2.22-201ENST00000636441 106 ntBASIC0.27□□□□□ -2.37
NKX2-1P43699 MIR330-201ENST00000362196 94 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 Y_RNA.30-201ENST00000362572 97 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 Y_RNA.93-201ENST00000363066 109 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 Y_RNA.185-201ENST00000363894 100 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 RNU6-1325P-201ENST00000364905 105 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 RNU6-215P-201ENST00000365169 102 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 RNY4P18-201ENST00000391107 89 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 MIR1265-201ENST00000408444 86 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 Y_RNA.596-201ENST00000410462 109 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 AC093423.1-201ENST00000440817 142 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 AL109933.3-201ENST00000619095 188 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
NKX2-1P43699 SNORA9.1-201ENST00000362412 131 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 RNU6-766P-201ENST00000362478 107 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 RNU6-269P-201ENST00000391077 97 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 RNU6-972P-201ENST00000391208 107 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 RNU6-554P-201ENST00000410466 106 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 AL161932.1-201ENST00000437408 146 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 AC069113.3-201ENST00000521019 150 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 MIR4711-201ENST00000578274 70 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 TRDV1-202ENST00000621643 102 ntBASIC0.25□□□□□ -2.37
NKX2-1P43699 RNU6-1290P-201ENST00000362957 109 ntBASIC0.24□□□□□ -2.37
NKX2-1P43699 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
NKX2-1P43699 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
NKX2-1P43699 RNU6-35P-201ENST00000384530 107 ntBASIC0.24□□□□□ -2.37
NKX2-1P43699 RNA5SP285-201ENST00000516619 119 ntBASIC0.24□□□□□ -2.37
NKX2-1P43699 U7.6-201ENST00000610841 64 ntBASIC0.24□□□□□ -2.37
NKX2-1P43699 Y_RNA.283-201ENST00000364798 112 ntBASIC0.23□□□□□ -2.37
NKX2-1P43699 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.23□□□□□ -2.37
NKX2-1P43699 RNA5SP193-201ENST00000410353 107 ntBASIC0.23□□□□□ -2.37
NKX2-1P43699 Y_RNA.705-201ENST00000516862 110 ntBASIC0.23□□□□□ -2.37
NKX2-1P43699 AL513043.2-201ENST00000573941 143 ntBASIC0.23□□□□□ -2.37
NKX2-1P43699 MIR371B-201ENST00000638082 66 ntBASIC0.23□□□□□ -2.37
NKX2-1P43699 RNU6-957P-201ENST00000363652 99 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 MIR216B-201ENST00000390186 82 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 RNU6-466P-201ENST00000391224 103 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 MIR548L-201ENST00000408303 86 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 RNU6-287P-201ENST00000516230 98 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 RNU6-919P-201ENST00000516731 104 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 MIR548AG2-201ENST00000581228 64 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 MIR4743-201ENST00000584576 69 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 MIR548Z-201ENST00000584743 97 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 AC012531.4-201ENST00000616509 177 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 MIR6086-201ENST00000638065 55 ntBASIC0.22□□□□□ -2.37
NKX2-1P43699 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
NKX2-1P43699 SNORA42.1-201ENST00000363515 137 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 RNU1-141P-201ENST00000364623 158 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 SNORD58A-201ENST00000383875 65 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 SNORA51.5-201ENST00000384126 131 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 Y_RNA.544-201ENST00000384650 113 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 MIR519E-201ENST00000385075 84 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 RNU6-75P-201ENST00000515944 104 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 RNA5SP330-201ENST00000517096 96 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 AC025521.1-201ENST00000621624 286 ntBASIC0.21□□□□□ -2.38
NKX2-1P43699 RNU6-664P-201ENST00000362381 107 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 Y_RNA.207-201ENST00000364142 106 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 RNA5SP128-201ENST00000365305 116 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 RNU6-756P-201ENST00000383997 107 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 Y_RNA.467-201ENST00000384297 102 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 MIR590-201ENST00000385008 97 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 RNU6-887P-201ENST00000410660 100 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 RNA5SP67-201ENST00000516422 131 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 MIR4696-201ENST00000581431 70 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 MIR548AD-201ENST00000584780 82 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 SNORA70.25-201ENST00000612741 95 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 MIR2052-201ENST00000636055 55 ntBASIC0.2□□□□□ -2.38
NKX2-1P43699 RNU6-161P-201ENST00000363051 106 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 RNU6-302P-201ENST00000365249 107 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 U3.27-201ENST00000391237 200 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 SNORA19.1-201ENST00000410656 129 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 SNORD57-201ENST00000448188 72 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 MIR2113-201ENST00000459007 91 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 snoU13.19-201ENST00000459148 104 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 snoU13.11-201ENST00000459219 104 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 RNU6-782P-201ENST00000516852 104 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 AC103810.7-201ENST00000607821 91 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 AC069503.3-201ENST00000618674 145 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 U6.100-201ENST00000636230 99 ntBASIC0.19□□□□□ -2.38
NKX2-1P43699 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
NKX2-1P43699 RNU6-46P-201ENST00000383860 107 ntBASIC0.18□□□□□ -2.38
NKX2-1P43699 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms