Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 U7.6-201ENST00000610841 64 ntBASIC0.27□□□□□ -2.37
PTPN9P43378 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
PTPN9P43378 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
PTPN9P43378 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
PTPN9P43378 RNU6-957P-201ENST00000363652 99 ntBASIC0.26□□□□□ -2.37
PTPN9P43378 Y_RNA.283-201ENST00000364798 112 ntBASIC0.26□□□□□ -2.37
PTPN9P43378 RNU6-1325P-201ENST00000364905 105 ntBASIC0.26□□□□□ -2.37
PTPN9P43378 Y_RNA.423-201ENST00000384057 113 ntBASIC0.26□□□□□ -2.37
PTPN9P43378 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
PTPN9P43378 uc_338.28-201ENST00000612082 187 ntBASIC0.26□□□□□ -2.37
PTPN9P43378 MIR7-2-201ENST00000384970 110 ntBASIC0.25□□□□□ -2.37
PTPN9P43378 AL513043.2-201ENST00000573941 143 ntBASIC0.25□□□□□ -2.37
PTPN9P43378 AC025521.1-201ENST00000621624 286 ntBASIC0.25□□□□□ -2.37
PTPN9P43378 U6.100-201ENST00000636230 99 ntBASIC0.25□□□□□ -2.37
PTPN9P43378 RNU6-766P-201ENST00000362478 107 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 Y_RNA.291-201ENST00000364886 113 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 RNA5SP128-201ENST00000365305 116 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 SNORA51.5-201ENST00000384126 131 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 RNY4P18-201ENST00000391107 89 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 RNU6-972P-201ENST00000391208 107 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 SNORA19.1-201ENST00000410656 129 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 Y_RNA.705-201ENST00000516862 110 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 AC012531.4-201ENST00000616509 177 ntBASIC0.24□□□□□ -2.37
PTPN9P43378 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 RNU6-1290P-201ENST00000362957 109 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 RNU6-755P-201ENST00000364400 103 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 Y_RNA.467-201ENST00000384297 102 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 MIR760-201ENST00000390220 80 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 snoU13.11-201ENST00000459219 104 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 MIR548AG2-201ENST00000581228 64 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 AC103810.7-201ENST00000607821 91 ntBASIC0.23□□□□□ -2.37
PTPN9P43378 Y_RNA.93-201ENST00000363066 109 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU6-756P-201ENST00000383997 107 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 MIR590-201ENST00000385008 97 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 MIR519E-201ENST00000385075 84 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 MIR2113-201ENST00000459007 91 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU6-287P-201ENST00000516230 98 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU6-1232P-201ENST00000516299 86 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU6-795P-201ENST00000516323 103 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU6-158P-201ENST00000517104 100 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.22□□□□□ -2.37
PTPN9P43378 RNU6-664P-201ENST00000362381 107 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 SNORA42.1-201ENST00000363515 137 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 RNU1-141P-201ENST00000364623 158 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 RNU6-215P-201ENST00000365169 102 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 SNORD101-201ENST00000384027 73 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 Y_RNA.544-201ENST00000384650 113 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 MIR216B-201ENST00000390186 82 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 AL161932.1-201ENST00000437408 146 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 AC093423.1-201ENST00000440817 142 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 SNORA70.25-201ENST00000612741 95 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.21□□□□□ -2.38
PTPN9P43378 Y_RNA.107-201ENST00000363190 121 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 Y_RNA.205-201ENST00000364128 113 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 Y_RNA.207-201ENST00000364142 106 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 RNU6-887P-201ENST00000410660 100 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 AC006210.1-201ENST00000424882 111 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 RNA5SP484-201ENST00000458857 111 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.2□□□□□ -2.38
PTPN9P43378 MIR6779-201ENST00000617283 64 ntBASIC0.2□□□□□ -2.38
PTPN9P43378 RNA5SP457-201ENST00000363657 124 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 SNORD110-201ENST00000408189 75 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 AL031737.1-201ENST00000450125 223 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 RNU6-75P-201ENST00000515944 104 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 RNU6-65P-201ENST00000516332 98 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 MIR4696-201ENST00000581431 70 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
PTPN9P43378 RNU6-919P-201ENST00000516731 104 ntBASIC0.18□□□□□ -2.38
PTPN9P43378 MIR4536-1-201ENST00000583537 88 ntBASIC0.18□□□□□ -2.38
PTPN9P43378 MIR548Z-201ENST00000584743 97 ntBASIC0.18□□□□□ -2.38
PTPN9P43378 MIR548AD-201ENST00000584780 82 ntBASIC0.18□□□□□ -2.38
PTPN9P43378 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
PTPN9P43378 AC069503.3-201ENST00000618674 145 ntBASIC0.18□□□□□ -2.38
PTPN9P43378 SNORD116-10-201ENST00000363791 102 ntBASIC0.17□□□□□ -2.38
PTPN9P43378 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
PTPN9P43378 RNU6-935P-201ENST00000410371 100 ntBASIC0.17□□□□□ -2.38
PTPN9P43378 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
PTPN9P43378 NAMPTP3-201ENST00000569273 224 ntBASIC0.17□□□□□ -2.38
PTPN9P43378 MIR499B-201ENST00000636498 73 ntBASIC0.17□□□□□ -2.38
PTPN9P43378 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
PTPN9P43378 SNORD58A-201ENST00000383875 65 ntBASIC0.16□□□□□ -2.38
PTPN9P43378 MIR643-201ENST00000385267 97 ntBASIC0.16□□□□□ -2.38
PTPN9P43378 MIR501-201ENST00000390204 84 ntBASIC0.16□□□□□ -2.38
PTPN9P43378 RNU7-85P-201ENST00000458851 63 ntBASIC0.16□□□□□ -2.38
PTPN9P43378 RNU6-1057P-201ENST00000517162 102 ntBASIC0.16□□□□□ -2.38
PTPN9P43378 MIR4743-201ENST00000584576 69 ntBASIC0.16□□□□□ -2.38
PTPN9P43378 Y_RNA.125-201ENST00000363371 111 ntBASIC0.15□□□□□ -2.39
PTPN9P43378 Y_RNA.239-201ENST00000364444 113 ntBASIC0.15□□□□□ -2.39
PTPN9P43378 SNORD20-201ENST00000384550 80 ntBASIC0.15□□□□□ -2.39
PTPN9P43378 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
PTPN9P43378 MIR2052-201ENST00000636055 55 ntBASIC0.15□□□□□ -2.39
PTPN9P43378 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
PTPN9P43378 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PTPN9P43378 SNORD4B-201ENST00000459083 72 ntBASIC0.14□□□□□ -2.39
PTPN9P43378 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms