Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.18□□□□□ -2.6
SLC1A1P43005 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.18□□□□□ -2.6
SLC1A1P43005 AP002392.1-201ENST00000537692 208 ntBASIC-1.18□□□□□ -2.6
SLC1A1P43005 RNU6-363P-201ENST00000362895 105 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 MIR518B-201ENST00000385127 83 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 MIR548E-201ENST00000408287 88 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 MTND5P18-201ENST00000445624 1801 ntBASIC-1.19□□□□□ -2.6
SLC1A1P43005 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 MIR606-201ENST00000384851 96 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 AL353813.1-201ENST00000440700 253 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 AC130289.1-201ENST00000577321 73 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 MIR3179-1-201ENST00000578940 84 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 MIR3179-2-201ENST00000579107 84 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 MIR3179-3-201ENST00000579566 84 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 MIR3179-4-201ENST00000617599 84 ntBASIC-1.2□□□□□ -2.6
SLC1A1P43005 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.21□□□□□ -2.6
SLC1A1P43005 MIR548D2-201ENST00000384955 97 ntBASIC-1.21□□□□□ -2.6
SLC1A1P43005 MIR451A-201ENST00000385059 72 ntBASIC-1.21□□□□□ -2.6
SLC1A1P43005 AC097510.1-201ENST00000510945 133 ntBASIC-1.21□□□□□ -2.6
SLC1A1P43005 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.21□□□□□ -2.6
SLC1A1P43005 MIR5704-201ENST00000584029 77 ntBASIC-1.21□□□□□ -2.6
SLC1A1P43005 SNORD114-4-201ENST00000363962 75 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 SNORA20.1-201ENST00000364790 130 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 RNU6-476P-201ENST00000384726 107 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 SNORD83B-201ENST00000386745 93 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 RNU6-721P-201ENST00000410155 105 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 RN7SKP19-201ENST00000516016 252 ntBASIC-1.22□□□□□ -2.6
SLC1A1P43005 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 RNU4-36P-201ENST00000364294 144 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 RNU6-915P-201ENST00000364943 103 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 RNU4-11P-201ENST00000365287 132 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 RNU6-409P-201ENST00000384114 104 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 MIR1263-201ENST00000408324 86 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 RNA5SP136-201ENST00000410906 107 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.23□□□□□ -2.61
SLC1A1P43005 AP001094.1-201ENST00000579805 193 ntBASIC-1.23□□□□□ -2.61
SLC1A1P43005 RNU6-460P-201ENST00000391158 108 ntBASIC-1.24□□□□□ -2.61
SLC1A1P43005 SNORD22.1-201ENST00000516331 125 ntBASIC-1.24□□□□□ -2.61
SLC1A1P43005 AC062037.2-201ENST00000610137 73 ntBASIC-1.24□□□□□ -2.61
SLC1A1P43005 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.25□□□□□ -2.61
SLC1A1P43005 U3.27-201ENST00000391237 200 ntBASIC-1.25□□□□□ -2.61
SLC1A1P43005 MTCYBP9-201ENST00000431021 303 ntBASIC-1.25□□□□□ -2.61
SLC1A1P43005 RNU7-197P-201ENST00000458836 62 ntBASIC-1.25□□□□□ -2.61
SLC1A1P43005 AL442128.1-201ENST00000615151 90 ntBASIC-1.25□□□□□ -2.61
SLC1A1P43005 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 MIR1302-3-201ENST00000408128 138 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 RNA5SP67-201ENST00000516422 131 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 AC072026.1-201ENST00000605023 201 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 MIR6854-201ENST00000614935 69 ntBASIC-1.26□□□□□ -2.61
SLC1A1P43005 RNU6-647P-201ENST00000364243 107 ntBASIC-1.27□□□□□ -2.61
SLC1A1P43005 AC141273.2-201ENST00000618989 130 ntBASIC-1.27□□□□□ -2.61
SLC1A1P43005 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.28□□□□□ -2.61
SLC1A1P43005 SNORD42B-201ENST00000458893 67 ntBASIC-1.28□□□□□ -2.61
SLC1A1P43005 RNU6-738P-201ENST00000384531 106 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 MIR568-201ENST00000385036 95 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 AC022137.1-201ENST00000483735 151 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 RNU6-75P-201ENST00000515944 104 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 SCARNA17-201ENST00000516183 144 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 MIR8068-201ENST00000618032 68 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.29□□□□□ -2.62
SLC1A1P43005 MIR517B-201ENST00000385102 67 ntBASIC-1.3□□□□□ -2.62
SLC1A1P43005 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.3□□□□□ -2.62
SLC1A1P43005 AP000533.3-201ENST00000447704 118 ntBASIC-1.3□□□□□ -2.62
SLC1A1P43005 snoR1.1-201ENST00000628177 80 ntBASIC-1.3□□□□□ -2.62
SLC1A1P43005 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.31□□□□□ -2.62
SLC1A1P43005 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.31□□□□□ -2.62
SLC1A1P43005 SNORD114-25-201ENST00000363742 72 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 SNORD74.6-201ENST00000364796 70 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
SLC1A1P43005 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 FGF7P7-201ENST00000514120 227 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 RNU6-719P-201ENST00000516671 104 ntBASIC-1.32□□□□□ -2.62
SLC1A1P43005 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 RNU6-151P-201ENST00000364158 107 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 RNU6-816P-201ENST00000390914 107 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 RNU6-65P-201ENST00000516332 98 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.33□□□□□ -2.62
SLC1A1P43005 MIR6773-201ENST00000612812 74 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms