Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLCN1P35523 RNU6-1241P-201ENST00000384536 107 ntBASIC1.91□□□□□ -2.1
CLCN1P35523 RNU6-539P-201ENST00000516665 103 ntBASIC1.91□□□□□ -2.1
CLCN1P35523 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLCN1P35523 RNU6-1126P-201ENST00000384002 107 ntBASIC1.9□□□□□ -2.11
CLCN1P35523 AC002350.1-201ENST00000490759 375 ntBASIC1.9□□□□□ -2.11
CLCN1P35523 MIR3920-201ENST00000581751 86 ntBASIC1.9□□□□□ -2.11
CLCN1P35523 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.9□□□□□ -2.11
CLCN1P35523 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.9□□□□□ -2.11
CLCN1P35523 RNU6-590P-201ENST00000365039 107 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 MIR644A-201ENST00000385262 94 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 FABP5P4-201ENST00000437203 171 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 RNU6-1110P-201ENST00000516462 101 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 MIR3675-201ENST00000583661 73 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 MIR6845-201ENST00000613182 61 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 MIR4773-1-201ENST00000637203 78 ntBASIC1.89□□□□□ -2.11
CLCN1P35523 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLCN1P35523 SNORD105-201ENST00000386910 85 ntBASIC1.88□□□□□ -2.11
CLCN1P35523 AC108667.1-201ENST00000428618 249 ntBASIC1.88□□□□□ -2.11
CLCN1P35523 RNU6-469P-201ENST00000516253 101 ntBASIC1.88□□□□□ -2.11
CLCN1P35523 MIR548AG2-201ENST00000581228 64 ntBASIC1.88□□□□□ -2.11
CLCN1P35523 snoU13.31-201ENST00000607291 104 ntBASIC1.88□□□□□ -2.11
CLCN1P35523 AC067863.3-201ENST00000624172 122 ntBASIC1.88□□□□□ -2.11
CLCN1P35523 MIR320A-201ENST00000385302 82 ntBASIC1.87□□□□□ -2.11
CLCN1P35523 MIR378A-201ENST00000362177 66 ntBASIC1.86□□□□□ -2.11
CLCN1P35523 RNU6-274P-201ENST00000459566 107 ntBASIC1.86□□□□□ -2.11
CLCN1P35523 RNU6-135P-201ENST00000516769 101 ntBASIC1.86□□□□□ -2.11
CLCN1P35523 AL078603.1-201ENST00000603824 313 ntBASIC1.86□□□□□ -2.11
CLCN1P35523 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CLCN1P35523 MIR7974-201ENST00000615835 79 ntBASIC1.86□□□□□ -2.11
CLCN1P35523 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLCN1P35523 RNU6-649P-201ENST00000384463 107 ntBASIC1.85□□□□□ -2.11
CLCN1P35523 MIR216B-201ENST00000390186 82 ntBASIC1.85□□□□□ -2.11
CLCN1P35523 RNU1-123P-201ENST00000458950 160 ntBASIC1.85□□□□□ -2.11
CLCN1P35523 U7.7-201ENST00000459276 60 ntBASIC1.85□□□□□ -2.11
CLCN1P35523 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCN1P35523 MIR617-201ENST00000385030 97 ntBASIC1.84□□□□□ -2.11
CLCN1P35523 SNORD30.1-201ENST00000391309 70 ntBASIC1.84□□□□□ -2.11
CLCN1P35523 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCN1P35523 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
CLCN1P35523 RNU6-382P-201ENST00000365181 106 ntBASIC1.83□□□□□ -2.12
CLCN1P35523 Y_RNA.258-201ENST00000364613 105 ntBASIC1.82□□□□□ -2.12
CLCN1P35523 Y_RNA.355-201ENST00000365462 98 ntBASIC1.82□□□□□ -2.12
CLCN1P35523 MIR499A-201ENST00000384903 122 ntBASIC1.82□□□□□ -2.12
CLCN1P35523 MIR4639-201ENST00000584938 69 ntBASIC1.82□□□□□ -2.12
CLCN1P35523 SNORA7.1-201ENST00000363750 139 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 SNORD115-31-201ENST00000365318 82 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 RNU6-540P-201ENST00000384622 101 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 MIR19B1-201ENST00000384829 87 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 MIR548L-201ENST00000408303 86 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 AC244669.1-204ENST00000621564 178 ntBASIC1.81□□□□□ -2.12
CLCN1P35523 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CLCN1P35523 RNU6-321P-201ENST00000410912 106 ntBASIC1.8□□□□□ -2.12
CLCN1P35523 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.8□□□□□ -2.12
CLCN1P35523 SNORD124-201ENST00000459577 104 ntBASIC1.8□□□□□ -2.12
CLCN1P35523 SNORD45.1-201ENST00000363181 77 ntBASIC1.79□□□□□ -2.12
CLCN1P35523 MIR200A-201ENST00000384875 90 ntBASIC1.79□□□□□ -2.12
CLCN1P35523 MIR519E-201ENST00000385075 84 ntBASIC1.79□□□□□ -2.12
CLCN1P35523 SNORD28-201ENST00000384706 75 ntBASIC1.78□□□□□ -2.12
CLCN1P35523 RNU7-74P-201ENST00000459104 62 ntBASIC1.78□□□□□ -2.12
CLCN1P35523 TRMT112P2-201ENST00000512910 132 ntBASIC1.78□□□□□ -2.12
CLCN1P35523 RNU6-752P-201ENST00000516376 102 ntBASIC1.78□□□□□ -2.12
CLCN1P35523 MIR4255-201ENST00000579351 72 ntBASIC1.78□□□□□ -2.12
CLCN1P35523 MIR8070-201ENST00000616510 88 ntBASIC1.78□□□□□ -2.12
CLCN1P35523 RNU6-895P-201ENST00000384125 103 ntBASIC1.77□□□□□ -2.13
CLCN1P35523 RNU6-663P-201ENST00000391105 106 ntBASIC1.77□□□□□ -2.13
CLCN1P35523 AC244098.3-201ENST00000424803 96 ntBASIC1.77□□□□□ -2.13
CLCN1P35523 SNORA25.15-201ENST00000516487 89 ntBASIC1.77□□□□□ -2.13
CLCN1P35523 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
CLCN1P35523 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
CLCN1P35523 SNORD75.2-201ENST00000408784 58 ntBASIC1.76□□□□□ -2.13
CLCN1P35523 AL691482.2-201ENST00000457453 84 ntBASIC1.76□□□□□ -2.13
CLCN1P35523 RNA5SP61-201ENST00000516453 100 ntBASIC1.76□□□□□ -2.13
CLCN1P35523 MIR8053-201ENST00000613344 75 ntBASIC1.76□□□□□ -2.13
CLCN1P35523 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CLCN1P35523 SNORD26-201ENST00000384147 75 ntBASIC1.75□□□□□ -2.13
CLCN1P35523 MIR573-201ENST00000384964 99 ntBASIC1.75□□□□□ -2.13
CLCN1P35523 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CLCN1P35523 RPS29P23-201ENST00000458635 123 ntBASIC1.75□□□□□ -2.13
CLCN1P35523 MIR3612-201ENST00000579753 87 ntBASIC1.75□□□□□ -2.13
CLCN1P35523 SNORD18A-201ENST00000363753 72 ntBASIC1.74□□□□□ -2.13
CLCN1P35523 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
CLCN1P35523 SNORD45A-201ENST00000384512 84 ntBASIC1.74□□□□□ -2.13
CLCN1P35523 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
CLCN1P35523 AC125388.1-201ENST00000459631 156 ntBASIC1.74□□□□□ -2.13
CLCN1P35523 MIR548O2-201ENST00000616090 70 ntBASIC1.74□□□□□ -2.13
CLCN1P35523 snoU13.18-201ENST00000459483 104 ntBASIC1.73□□□□□ -2.13
CLCN1P35523 MIR3678-201ENST00000578455 94 ntBASIC1.73□□□□□ -2.13
CLCN1P35523 U6.111-201ENST00000636093 83 ntBASIC1.73□□□□□ -2.13
CLCN1P35523 SNORA25.8-201ENST00000364831 128 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 Y_RNA.340-201ENST00000365330 92 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 RNU6-1335P-201ENST00000365426 107 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 MIR150-201ENST00000385048 84 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 RNU6-604P-201ENST00000390917 100 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 SNORD41.1-201ENST00000391000 69 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 NAMPTP3-201ENST00000569273 224 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 AC025627.3-201ENST00000582078 182 ntBASIC1.72□□□□□ -2.13
CLCN1P35523 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms