Protein–RNA interactions for Protein: P35498

SCN1A, Sodium channel protein type 1 subunit alpha, humanhuman

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1AP35498 RNU6-781P-201ENST00000516377 101 ntBASIC-0.38□□□□□ -2.47
SCN1AP35498 MIR4536-1-201ENST00000583537 88 ntBASIC-0.38□□□□□ -2.47
SCN1AP35498 MIR4788-201ENST00000639104 80 ntBASIC-0.38□□□□□ -2.47
SCN1AP35498 SNORD101-201ENST00000384027 73 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 MT-TQ-201ENST00000387372 72 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 RNU6-466P-201ENST00000391224 103 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 RNU6-287P-201ENST00000516230 98 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 RNU6-175P-201ENST00000516896 107 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 MIR548X2-201ENST00000579776 100 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.39□□□□□ -2.47
SCN1AP35498 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 RNY4P6-201ENST00000363667 96 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 RNA5SP275-201ENST00000363936 118 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 SNORD114-4-201ENST00000363962 75 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 RNU6-772P-201ENST00000516042 105 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 AC025166.1-201ENST00000612411 163 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 RNU6-154P-201ENST00000384306 106 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 AP001328.1-201ENST00000528550 176 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 RN7SL660P-201ENST00000614852 299 ntBASIC-0.4□□□□□ -2.47
SCN1AP35498 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.41□□□□□ -2.47
SCN1AP35498 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.41□□□□□ -2.47
SCN1AP35498 SNORA25.13-201ENST00000516395 103 ntBASIC-0.41□□□□□ -2.47
SCN1AP35498 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.47
SCN1AP35498 AC099654.10-201ENST00000640395 161 ntBASIC-0.41□□□□□ -2.47
SCN1AP35498 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MIR548G-201ENST00000408442 89 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 RNU6-182P-201ENST00000516970 105 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MIR4460-201ENST00000577862 86 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MIR548AX-201ENST00000580117 73 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MTND5P18-201ENST00000445624 1801 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MIR539-201ENST00000365690 78 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 RNU6-455P-201ENST00000384681 107 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MIR224-201ENST00000384889 81 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 RNU6-394P-201ENST00000410735 107 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 AL161932.1-201ENST00000437408 146 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 SPINT5P-201ENST00000448174 155 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 TRDV1-202ENST00000621643 102 ntBASIC-0.42□□□□□ -2.48
SCN1AP35498 MIR148A-201ENST00000362215 68 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 SNORD114-14-201ENST00000362723 75 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 U8.6-201ENST00000364939 135 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 RNU6-75P-201ENST00000515944 104 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 RNA5SP272-201ENST00000516095 111 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 MTND5P41-201ENST00000517498 206 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 AL670379.3-201ENST00000605040 251 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 RNU6-480P-201ENST00000384332 107 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 RNU6-935P-201ENST00000410371 100 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 AL513043.2-201ENST00000573941 143 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.43□□□□□ -2.48
SCN1AP35498 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 SNORD58C-201ENST00000365223 64 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 RNU6-30P-201ENST00000384561 107 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 MIR451A-201ENST00000385059 72 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 AP000676.1-201ENST00000533307 52 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 MIR4696-201ENST00000581431 70 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 MIR548AE1-201ENST00000583292 70 ntBASIC-0.44□□□□□ -2.48
SCN1AP35498 SNORD49B-201ENST00000365172 72 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 snoU13.11-201ENST00000459219 104 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 RNU6-719P-201ENST00000516671 104 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 RNU6-901P-201ENST00000384593 106 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 MIR4436A-201ENST00000585278 85 ntBASIC-0.45□□□□□ -2.48
SCN1AP35498 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.45□□□□□ -2.48
SCN1AP35498 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.46□□□□□ -2.48
SCN1AP35498 MTND4LP9-201ENST00000427694 174 ntBASIC-0.46□□□□□ -2.48
SCN1AP35498 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.46□□□□□ -2.48
SCN1AP35498 AC025521.1-201ENST00000621624 286 ntBASIC-0.46□□□□□ -2.48
SCN1AP35498 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.47□□□□□ -2.48
SCN1AP35498 RNU6-65P-201ENST00000516332 98 ntBASIC-0.47□□□□□ -2.48
SCN1AP35498 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
SCN1AP35498 SNORD56B-201ENST00000384713 71 ntBASIC-0.47□□□□□ -2.49
SCN1AP35498 AC114755.3-201ENST00000481111 251 ntBASIC-0.47□□□□□ -2.49
SCN1AP35498 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 SNORA49-201ENST00000386157 136 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 SNORA7.5-201ENST00000410672 110 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 MIR4679-2-201ENST00000578358 77 ntBASIC-0.48□□□□□ -2.49
SCN1AP35498 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms