Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SNORD115-44-201ENST00000365391 82 ntBASIC0.73□□□□□ -2.29
THBS4P35443 Y_RNA.611-201ENST00000410682 108 ntBASIC0.73□□□□□ -2.29
THBS4P35443 RNU6-75P-201ENST00000515944 104 ntBASIC0.73□□□□□ -2.29
THBS4P35443 RN7SKP12-201ENST00000516275 143 ntBASIC0.73□□□□□ -2.29
THBS4P35443 RNU6-267P-201ENST00000516714 103 ntBASIC0.73□□□□□ -2.29
THBS4P35443 RNU6-1057P-201ENST00000517162 102 ntBASIC0.73□□□□□ -2.29
THBS4P35443 RNU7-161P-201ENST00000517289 62 ntBASIC0.73□□□□□ -2.29
THBS4P35443 AC104996.3-201ENST00000590718 94 ntBASIC0.73□□□□□ -2.29
THBS4P35443 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
THBS4P35443 AC244669.1-204ENST00000621564 178 ntBASIC0.73□□□□□ -2.29
THBS4P35443 AC067863.3-201ENST00000624172 122 ntBASIC0.73□□□□□ -2.29
THBS4P35443 RNA5SP403-201ENST00000363598 108 ntBASIC0.72□□□□□ -2.29
THBS4P35443 RNU6-242P-201ENST00000384359 107 ntBASIC0.72□□□□□ -2.29
THBS4P35443 SNORD28-201ENST00000384706 75 ntBASIC0.72□□□□□ -2.29
THBS4P35443 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
THBS4P35443 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.72□□□□□ -2.29
THBS4P35443 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
THBS4P35443 SNORD115-27-201ENST00000364430 82 ntBASIC0.71□□□□□ -2.3
THBS4P35443 RNU6-820P-201ENST00000384273 107 ntBASIC0.71□□□□□ -2.3
THBS4P35443 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
THBS4P35443 SNORA72.7-201ENST00000516349 94 ntBASIC0.71□□□□□ -2.3
THBS4P35443 SCARNA16.5-201ENST00000517114 183 ntBASIC0.71□□□□□ -2.3
THBS4P35443 MIR3064-201ENST00000581130 66 ntBASIC0.71□□□□□ -2.3
THBS4P35443 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
THBS4P35443 RNU6-664P-201ENST00000362381 107 ntBASIC0.7□□□□□ -2.3
THBS4P35443 Y_RNA.73-201ENST00000362910 113 ntBASIC0.7□□□□□ -2.3
THBS4P35443 RNY1P8-201ENST00000383970 114 ntBASIC0.7□□□□□ -2.3
THBS4P35443 Y_RNA.491-201ENST00000384417 107 ntBASIC0.7□□□□□ -2.3
THBS4P35443 MIR140-201ENST00000385282 100 ntBASIC0.7□□□□□ -2.3
THBS4P35443 RNY4P29-201ENST00000410801 97 ntBASIC0.7□□□□□ -2.3
THBS4P35443 AC022137.1-201ENST00000483735 151 ntBASIC0.7□□□□□ -2.3
THBS4P35443 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.7□□□□□ -2.3
THBS4P35443 RNA5SP47-201ENST00000517230 109 ntBASIC0.7□□□□□ -2.3
THBS4P35443 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
THBS4P35443 AC062037.1-201ENST00000605302 128 ntBASIC0.7□□□□□ -2.3
THBS4P35443 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.7□□□□□ -2.3
THBS4P35443 RNU6-716P-201ENST00000365621 103 ntBASIC0.69□□□□□ -2.3
THBS4P35443 RNU6-132P-201ENST00000383863 107 ntBASIC0.69□□□□□ -2.3
THBS4P35443 RNU6-935P-201ENST00000410371 100 ntBASIC0.69□□□□□ -2.3
THBS4P35443 RNU7-74P-201ENST00000459104 62 ntBASIC0.69□□□□□ -2.3
THBS4P35443 RNA5SP227-201ENST00000516184 113 ntBASIC0.69□□□□□ -2.3
THBS4P35443 RNA5SP94-201ENST00000516917 108 ntBASIC0.69□□□□□ -2.3
THBS4P35443 CYP3A137P-201ENST00000562436 69 ntBASIC0.69□□□□□ -2.3
THBS4P35443 MIR4796-201ENST00000580742 81 ntBASIC0.69□□□□□ -2.3
THBS4P35443 MIR548BB-201ENST00000626714 66 ntBASIC0.69□□□□□ -2.3
THBS4P35443 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
THBS4P35443 Y_RNA.426-201ENST00000384068 113 ntBASIC0.68□□□□□ -2.3
THBS4P35443 RNA5SP292-201ENST00000390974 118 ntBASIC0.68□□□□□ -2.3
THBS4P35443 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
THBS4P35443 MIR4696-201ENST00000581431 70 ntBASIC0.68□□□□□ -2.3
THBS4P35443 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
THBS4P35443 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
THBS4P35443 RNU6-497P-201ENST00000365316 104 ntBASIC0.67□□□□□ -2.3
THBS4P35443 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
THBS4P35443 MTRNR2L2-201ENST00000604882 87 ntBASIC0.67□□□□□ -2.3
THBS4P35443 Y_RNA.207-201ENST00000364142 106 ntBASIC0.66□□□□□ -2.3
THBS4P35443 RNU6-1126P-201ENST00000384002 107 ntBASIC0.66□□□□□ -2.3
THBS4P35443 MIR451A-201ENST00000385059 72 ntBASIC0.66□□□□□ -2.3
THBS4P35443 MIR2113-201ENST00000459007 91 ntBASIC0.66□□□□□ -2.3
THBS4P35443 AC093729.1-201ENST00000513074 128 ntBASIC0.66□□□□□ -2.3
THBS4P35443 RNU6-287P-201ENST00000516230 98 ntBASIC0.66□□□□□ -2.3
THBS4P35443 SNORA18.5-201ENST00000516616 101 ntBASIC0.66□□□□□ -2.3
THBS4P35443 RNA5SP268-201ENST00000516828 124 ntBASIC0.66□□□□□ -2.3
THBS4P35443 RNU6-1223P-201ENST00000517124 104 ntBASIC0.66□□□□□ -2.3
THBS4P35443 MIR5588-201ENST00000581890 63 ntBASIC0.66□□□□□ -2.3
THBS4P35443 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
THBS4P35443 AC006160.2-201ENST00000637708 154 ntBASIC0.66□□□□□ -2.3
THBS4P35443 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.3
THBS4P35443 RNU5F-1-201ENST00000362507 117 ntBASIC0.65□□□□□ -2.31
THBS4P35443 RNY4P3-201ENST00000365254 95 ntBASIC0.65□□□□□ -2.31
THBS4P35443 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
THBS4P35443 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.65□□□□□ -2.31
THBS4P35443 MIR3920-201ENST00000581751 86 ntBASIC0.65□□□□□ -2.31
THBS4P35443 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
THBS4P35443 MIR6515-201ENST00000619843 57 ntBASIC0.65□□□□□ -2.31
THBS4P35443 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.65□□□□□ -2.31
THBS4P35443 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
THBS4P35443 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
THBS4P35443 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
THBS4P35443 Y_RNA.607-201ENST00000410597 98 ntBASIC0.64□□□□□ -2.31
THBS4P35443 SNORD71-201ENST00000411292 86 ntBASIC0.64□□□□□ -2.31
THBS4P35443 RNU7-153P-201ENST00000516455 62 ntBASIC0.64□□□□□ -2.31
THBS4P35443 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
THBS4P35443 RNU6-726P-201ENST00000364680 107 ntBASIC0.63□□□□□ -2.31
THBS4P35443 MIR617-201ENST00000385030 97 ntBASIC0.63□□□□□ -2.31
THBS4P35443 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
THBS4P35443 SNORD41.1-201ENST00000391000 69 ntBASIC0.63□□□□□ -2.31
THBS4P35443 FGF7P7-201ENST00000514120 227 ntBASIC0.63□□□□□ -2.31
THBS4P35443 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
THBS4P35443 SNORA36.1-201ENST00000363424 132 ntBASIC0.62□□□□□ -2.31
THBS4P35443 RNU6-1276P-201ENST00000365372 104 ntBASIC0.62□□□□□ -2.31
THBS4P35443 RNU6-979P-201ENST00000383896 107 ntBASIC0.62□□□□□ -2.31
THBS4P35443 Y_RNA.388-201ENST00000383919 113 ntBASIC0.62□□□□□ -2.31
THBS4P35443 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
THBS4P35443 SNORA8.2-201ENST00000384372 139 ntBASIC0.62□□□□□ -2.31
THBS4P35443 MIR7-2-201ENST00000384970 110 ntBASIC0.62□□□□□ -2.31
THBS4P35443 MIR216B-201ENST00000390186 82 ntBASIC0.62□□□□□ -2.31
THBS4P35443 SNORA25.13-201ENST00000516395 103 ntBASIC0.62□□□□□ -2.31
THBS4P35443 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
THBS4P35443 RNA5SP173-201ENST00000364857 136 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms