Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL590491.3-201ENST00000610731 82 ntBASIC-0.58□□□□□ -2.5
RFC4P35249 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.59□□□□□ -2.5
RFC4P35249 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.59□□□□□ -2.5
RFC4P35249 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.59□□□□□ -2.5
RFC4P35249 AC004792.1-201ENST00000614523 137 ntBASIC-0.59□□□□□ -2.5
RFC4P35249 AP001340.1-201ENST00000624405 217 ntBASIC-0.59□□□□□ -2.5
RFC4P35249 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 SNORD114-11-201ENST00000363738 75 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 RNU6-409P-201ENST00000384114 104 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 MIR224-201ENST00000384889 81 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 MIR652-201ENST00000385278 98 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 AL158147.1-201ENST00000443970 75 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 SNORD126-201ENST00000459475 77 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.6□□□□□ -2.51
RFC4P35249 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.6□□□□□ -2.51
RFC4P35249 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
RFC4P35249 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.61□□□□□ -2.51
RFC4P35249 RNU6-804P-201ENST00000384286 107 ntBASIC-0.61□□□□□ -2.51
RFC4P35249 RNU6-455P-201ENST00000384681 107 ntBASIC-0.61□□□□□ -2.51
RFC4P35249 RNU6-394P-201ENST00000410735 107 ntBASIC-0.61□□□□□ -2.51
RFC4P35249 MIR548X2-201ENST00000579776 100 ntBASIC-0.61□□□□□ -2.51
RFC4P35249 RNU6-480P-201ENST00000384332 107 ntBASIC-0.62□□□□□ -2.51
RFC4P35249 MIR196A2-201ENST00000385189 110 ntBASIC-0.62□□□□□ -2.51
RFC4P35249 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.62□□□□□ -2.51
RFC4P35249 snoU13.11-201ENST00000459219 104 ntBASIC-0.62□□□□□ -2.51
RFC4P35249 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.62□□□□□ -2.51
RFC4P35249 MIR4696-201ENST00000581431 70 ntBASIC-0.62□□□□□ -2.51
RFC4P35249 MIR409-201ENST00000362237 79 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 MIR20A-201ENST00000362279 71 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 RNA5SP331-201ENST00000364986 107 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 SNORD101-201ENST00000384027 73 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
RFC4P35249 RNA5SP272-201ENST00000516095 111 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 AC007012.1-201ENST00000567192 175 ntBASIC-0.63□□□□□ -2.51
RFC4P35249 RNU6-664P-201ENST00000362381 107 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 RNU6-235P-201ENST00000362644 107 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 RNU6-466P-201ENST00000391224 103 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 AC114755.3-201ENST00000481111 251 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 AP000676.1-201ENST00000533307 52 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 AL442128.1-201ENST00000615151 90 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 AC099654.10-201ENST00000640395 161 ntBASIC-0.64□□□□□ -2.51
RFC4P35249 RNY4P6-201ENST00000363667 96 ntBASIC-0.65□□□□□ -2.51
RFC4P35249 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.65□□□□□ -2.51
RFC4P35249 SNORA32.3-201ENST00000384772 121 ntBASIC-0.65□□□□□ -2.51
RFC4P35249 RNU6-816P-201ENST00000390914 107 ntBASIC-0.65□□□□□ -2.51
RFC4P35249 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.65□□□□□ -2.51
RFC4P35249 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.65□□□□□ -2.51
RFC4P35249 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.66□□□□□ -2.52
RFC4P35249 RNA5SP66-201ENST00000517178 101 ntBASIC-0.66□□□□□ -2.52
RFC4P35249 MIR3144-201ENST00000579460 79 ntBASIC-0.66□□□□□ -2.52
RFC4P35249 U7.2-201ENST00000607576 63 ntBASIC-0.66□□□□□ -2.52
RFC4P35249 AC025166.1-201ENST00000612411 163 ntBASIC-0.66□□□□□ -2.52
RFC4P35249 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.52
RFC4P35249 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.67□□□□□ -2.52
RFC4P35249 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.67□□□□□ -2.52
RFC4P35249 MIR9-2-201ENST00000384838 87 ntBASIC-0.67□□□□□ -2.52
RFC4P35249 MIR569-201ENST00000385228 96 ntBASIC-0.67□□□□□ -2.52
RFC4P35249 AC244090.1-201ENST00000441884 93 ntBASIC-0.67□□□□□ -2.52
RFC4P35249 RNU6-762P-201ENST00000517107 102 ntBASIC-0.67□□□□□ -2.52
RFC4P35249 MTND5P18-201ENST00000445624 1801 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 RNU6-284P-201ENST00000411105 106 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 AL445193.1-201ENST00000441183 141 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 MIR548O2-201ENST00000616090 70 ntBASIC-0.68□□□□□ -2.52
RFC4P35249 SNORD58C-201ENST00000365223 64 ntBASIC-0.69□□□□□ -2.52
RFC4P35249 RNA5SP67-201ENST00000516422 131 ntBASIC-0.69□□□□□ -2.52
RFC4P35249 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.7□□□□□ -2.52
RFC4P35249 RNU6-935P-201ENST00000410371 100 ntBASIC-0.7□□□□□ -2.52
RFC4P35249 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.7□□□□□ -2.52
RFC4P35249 MIR4432-201ENST00000581823 84 ntBASIC-0.7□□□□□ -2.52
RFC4P35249 uc_338.36-201ENST00000622331 158 ntBASIC-0.7□□□□□ -2.52
RFC4P35249 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.71□□□□□ -2.52
RFC4P35249 MT-TG-201ENST00000387429 68 ntBASIC-0.71□□□□□ -2.52
RFC4P35249 MIR216B-201ENST00000390186 82 ntBASIC-0.71□□□□□ -2.52
RFC4P35249 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.71□□□□□ -2.52
RFC4P35249 MTND5P41-201ENST00000517498 206 ntBASIC-0.71□□□□□ -2.52
RFC4P35249 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 RNU6-54P-201ENST00000365563 107 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 RNU6-900P-201ENST00000384498 102 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 RNU6-901P-201ENST00000384593 106 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 MIR451A-201ENST00000385059 72 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 SNORA49-201ENST00000386157 136 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 MIR548AX-201ENST00000580117 73 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 AC096720.1-201ENST00000604441 183 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 RNU6-86P-201ENST00000606534 107 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 FTX_2.1-201ENST00000618816 94 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 AC025521.1-201ENST00000621624 286 ntBASIC-0.72□□□□□ -2.52
RFC4P35249 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.73□□□□□ -2.53
RFC4P35249 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.73□□□□□ -2.53
RFC4P35249 MIR577-201ENST00000385196 96 ntBASIC-0.73□□□□□ -2.53
RFC4P35249 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.73□□□□□ -2.53
RFC4P35249 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.73□□□□□ -2.53
RFC4P35249 RNU6-426P-201ENST00000516464 97 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms