Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 RPS29P8-201ENST00000445109 171 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 AC097510.1-201ENST00000510945 133 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.53□□□□□ -2.49
SHMT2P34897 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-900P-201ENST00000384498 102 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-394P-201ENST00000410735 107 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU7-55P-201ENST00000459426 62 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-781P-201ENST00000516377 101 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 AP000676.1-201ENST00000533307 52 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 MIR4696-201ENST00000581431 70 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 RNU6-90P-201ENST00000606352 106 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 AC004792.1-201ENST00000614523 137 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 MIR548O2-201ENST00000616090 70 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 AC099654.10-201ENST00000640395 161 ntBASIC-0.54□□□□□ -2.5
SHMT2P34897 MIR20A-201ENST00000362279 71 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 SNORD114-14-201ENST00000362723 75 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 MT-TG-201ENST00000387429 68 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 AC244090.1-201ENST00000441884 93 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 AL158147.1-201ENST00000443970 75 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 snoU13.13-201ENST00000458842 104 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.55□□□□□ -2.5
SHMT2P34897 MIR548X2-201ENST00000579776 100 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 RNU6-86P-201ENST00000606534 107 ntBASIC-0.55□□□□□ -2.5
SHMT2P34897 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 RNU6-409P-201ENST00000384114 104 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 SNORA3B-201ENST00000391305 131 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 AL445193.1-201ENST00000441183 141 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 SNORD38.3-201ENST00000516599 73 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 U7.2-201ENST00000607576 63 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
SHMT2P34897 MIR548E-201ENST00000408287 88 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 snoU13.11-201ENST00000459219 104 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 MIR6851-201ENST00000617060 67 ntBASIC-0.57□□□□□ -2.5
SHMT2P34897 RNU6-664P-201ENST00000362381 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-54P-201ENST00000365563 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-804P-201ENST00000384286 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-476P-201ENST00000384726 107 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 MIR569-201ENST00000385228 96 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-466P-201ENST00000391224 103 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 SNORD42B-201ENST00000458893 67 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 RNU6-75P-201ENST00000515944 104 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.58□□□□□ -2.5
SHMT2P34897 SNORD115-25-201ENST00000362619 82 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 SNORD101-201ENST00000384027 73 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 RNA5SP451-201ENST00000410588 110 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 AL442128.1-201ENST00000615151 90 ntBASIC-0.59□□□□□ -2.5
SHMT2P34897 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 RNU6-721P-201ENST00000410155 105 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR1912-201ENST00000410389 80 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR3144-201ENST00000579460 79 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR5704-201ENST00000584029 77 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 AP001180.6-201ENST00000584918 159 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 MIR8068-201ENST00000618032 68 ntBASIC-0.6□□□□□ -2.51
SHMT2P34897 RNU6-502P-201ENST00000362419 108 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNY4P6-201ENST00000363667 96 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-816P-201ENST00000390914 107 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 RNU6-762P-201ENST00000517107 102 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 MIR5589-201ENST00000579442 60 ntBASIC-0.61□□□□□ -2.51
SHMT2P34897 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 SNORD58C-201ENST00000365223 64 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 MIR3681-201ENST00000580089 72 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 MIR4802-201ENST00000581881 80 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 AC025166.1-201ENST00000612411 163 ntBASIC-0.62□□□□□ -2.51
SHMT2P34897 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 MIR216B-201ENST00000390186 82 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
SHMT2P34897 RNU6-935P-201ENST00000410371 100 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.63□□□□□ -2.51
SHMT2P34897 RNU6-973P-201ENST00000364690 107 ntBASIC-0.64□□□□□ -2.51
SHMT2P34897 RNU6-901P-201ENST00000384593 106 ntBASIC-0.64□□□□□ -2.51
SHMT2P34897 MTND5P18-201ENST00000445624 1801 ntBASIC-0.64□□□□□ -2.51
SHMT2P34897 MIR101-1-201ENST00000362265 75 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 MIR451A-201ENST00000385059 72 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 RNU6-337P-201ENST00000391243 106 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 RNA5SP272-201ENST00000516095 111 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 AC025521.1-201ENST00000621624 286 ntBASIC-0.65□□□□□ -2.51
SHMT2P34897 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.66□□□□□ -2.52
SHMT2P34897 MIR204-201ENST00000385200 110 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms