Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNORD115-37-201ENST00000363768 82 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 Y_RNA.205-201ENST00000364128 113 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 RNU6-497P-201ENST00000365316 104 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 SNORD101-201ENST00000384027 73 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 RNU6-1265P-201ENST00000516342 103 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 RNU7-13P-201ENST00000516413 62 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXC12P31275 AC067863.3-201ENST00000624172 122 ntBASIC1.03□□□□□ -2.24
HOXC12P31275 Y_RNA.239-201ENST00000364444 113 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 RNA5SP173-201ENST00000364857 136 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 RNU6-242P-201ENST00000384359 107 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 RNA5SP292-201ENST00000390974 118 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXC12P31275 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 MIR3064-201ENST00000581130 66 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 MIR4696-201ENST00000581431 70 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 MIR5588-201ENST00000581890 63 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 AC104996.3-201ENST00000590718 94 ntBASIC1.02□□□□□ -2.25
HOXC12P31275 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
HOXC12P31275 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
HOXC12P31275 AC093729.1-201ENST00000513074 128 ntBASIC1.01□□□□□ -2.25
HOXC12P31275 SNORA18.5-201ENST00000516616 101 ntBASIC1.01□□□□□ -2.25
HOXC12P31275 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HOXC12P31275 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
HOXC12P31275 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
HOXC12P31275 RNU6-979P-201ENST00000383896 107 ntBASIC1□□□□□ -2.25
HOXC12P31275 RNU6-573P-201ENST00000383938 106 ntBASIC1□□□□□ -2.25
HOXC12P31275 Y_RNA.491-201ENST00000384417 107 ntBASIC1□□□□□ -2.25
HOXC12P31275 RNU6-1152P-201ENST00000384576 107 ntBASIC1□□□□□ -2.25
HOXC12P31275 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1□□□□□ -2.25
HOXC12P31275 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1□□□□□ -2.25
HOXC12P31275 RNU6-592P-201ENST00000411333 103 ntBASIC1□□□□□ -2.25
HOXC12P31275 RNA5SP47-201ENST00000517230 109 ntBASIC1□□□□□ -2.25
HOXC12P31275 IST1-227ENST00000626438 126 ntTSL 5 BASIC1□□□□□ -2.25
HOXC12P31275 Y_RNA.426-201ENST00000384068 113 ntBASIC0.99□□□□□ -2.25
HOXC12P31275 MIR548L-201ENST00000408303 86 ntBASIC0.99□□□□□ -2.25
HOXC12P31275 RNU6-287P-201ENST00000516230 98 ntBASIC0.99□□□□□ -2.25
HOXC12P31275 MTRNR2L2-201ENST00000604882 87 ntBASIC0.99□□□□□ -2.25
HOXC12P31275 AC006160.2-201ENST00000637708 154 ntBASIC0.99□□□□□ -2.25
HOXC12P31275 Y_RNA.207-201ENST00000364142 106 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 RNU6-1276P-201ENST00000365372 104 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 SNORD115-44-201ENST00000365391 82 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 SNORA36.2-201ENST00000384004 127 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 RNA5SP436-201ENST00000516020 115 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 MIR4796-201ENST00000580742 81 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
HOXC12P31275 Y_RNA.374-201ENST00000365606 101 ntBASIC0.97□□□□□ -2.25
HOXC12P31275 MIR3920-201ENST00000581751 86 ntBASIC0.97□□□□□ -2.25
HOXC12P31275 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.97□□□□□ -2.25
HOXC12P31275 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.96□□□□□ -2.26
HOXC12P31275 SNORA25.13-201ENST00000516395 103 ntBASIC0.96□□□□□ -2.26
HOXC12P31275 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
HOXC12P31275 RN7SL793P-201ENST00000583259 296 ntBASIC0.96□□□□□ -2.26
HOXC12P31275 RNU6-716P-201ENST00000365621 103 ntBASIC0.95□□□□□ -2.26
HOXC12P31275 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
HOXC12P31275 SCARNA16.5-201ENST00000517114 183 ntBASIC0.95□□□□□ -2.26
HOXC12P31275 RNU6-1057P-201ENST00000517162 102 ntBASIC0.95□□□□□ -2.26
HOXC12P31275 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.95□□□□□ -2.26
HOXC12P31275 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
HOXC12P31275 Y_RNA.607-201ENST00000410597 98 ntBASIC0.94□□□□□ -2.26
HOXC12P31275 RNU7-171P-201ENST00000459581 62 ntBASIC0.94□□□□□ -2.26
HOXC12P31275 RNA5SP94-201ENST00000516917 108 ntBASIC0.94□□□□□ -2.26
HOXC12P31275 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.94□□□□□ -2.26
HOXC12P31275 RNY1P8-201ENST00000383970 114 ntBASIC0.93□□□□□ -2.26
HOXC12P31275 RNU6-935P-201ENST00000410371 100 ntBASIC0.93□□□□□ -2.26
HOXC12P31275 MIR2113-201ENST00000459007 91 ntBASIC0.93□□□□□ -2.26
HOXC12P31275 RNU6-726P-201ENST00000364680 107 ntBASIC0.92□□□□□ -2.26
HOXC12P31275 RNU6-1126P-201ENST00000384002 107 ntBASIC0.92□□□□□ -2.26
HOXC12P31275 RNA5SP227-201ENST00000516184 113 ntBASIC0.92□□□□□ -2.26
HOXC12P31275 AC140658.3-201ENST00000567603 271 ntBASIC0.92□□□□□ -2.26
HOXC12P31275 MIR548AG2-201ENST00000581228 64 ntBASIC0.92□□□□□ -2.26
HOXC12P31275 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
HOXC12P31275 SNORA36.1-201ENST00000363424 132 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 Y_RNA.437-201ENST00000384113 113 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 MIR451A-201ENST00000385059 72 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 RNU6-1052P-201ENST00000411398 104 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
HOXC12P31275 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 RNU6-719P-201ENST00000516671 104 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 RNA5SP268-201ENST00000516828 124 ntBASIC0.91□□□□□ -2.26
HOXC12P31275 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
HOXC12P31275 RNU6-1051P-201ENST00000365471 102 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 MIR617-201ENST00000385030 97 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 SNORD90-201ENST00000391145 111 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 FGF7P7-201ENST00000514120 227 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 MIR6828-201ENST00000636181 60 ntBASIC0.9□□□□□ -2.27
HOXC12P31275 RNY4P3-201ENST00000365254 95 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 RNU6-110P-201ENST00000384508 104 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 MIR216A-201ENST00000385063 110 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 RNU7-74P-201ENST00000459104 62 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms