Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 Y_RNA.174-201ENST00000363781 105 ntBASIC1.73□□□□□ -2.13
NID1P14543 RNU6-668P-201ENST00000364180 107 ntBASIC1.73□□□□□ -2.13
NID1P14543 Y_RNA.363-201ENST00000365529 113 ntBASIC1.73□□□□□ -2.13
NID1P14543 RNU6-1039P-201ENST00000383931 107 ntBASIC1.73□□□□□ -2.13
NID1P14543 SNORA17.3-201ENST00000391159 129 ntBASIC1.73□□□□□ -2.13
NID1P14543 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
NID1P14543 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
NID1P14543 RNU6-369P-201ENST00000362515 102 ntBASIC1.72□□□□□ -2.13
NID1P14543 Y_RNA.32-201ENST00000362589 110 ntBASIC1.72□□□□□ -2.13
NID1P14543 MIR633-201ENST00000384821 98 ntBASIC1.72□□□□□ -2.13
NID1P14543 MIR100-201ENST00000385259 80 ntBASIC1.72□□□□□ -2.13
NID1P14543 MIR934-201ENST00000401241 83 ntBASIC1.72□□□□□ -2.13
NID1P14543 MIR1287-201ENST00000408492 90 ntBASIC1.72□□□□□ -2.13
NID1P14543 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
NID1P14543 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
NID1P14543 RNU7-56P-201ENST00000458744 62 ntBASIC1.72□□□□□ -2.13
NID1P14543 RNU7-21P-201ENST00000459430 62 ntBASIC1.72□□□□□ -2.13
NID1P14543 SNORA31.14-201ENST00000516728 116 ntBASIC1.72□□□□□ -2.13
NID1P14543 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
NID1P14543 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
NID1P14543 MIR548AG2-201ENST00000581228 64 ntBASIC1.72□□□□□ -2.13
NID1P14543 AL359821.1-201ENST00000605519 182 ntBASIC1.72□□□□□ -2.13
NID1P14543 MIR6509-201ENST00000614603 85 ntBASIC1.72□□□□□ -2.13
NID1P14543 AL157834.3-201ENST00000615543 103 ntBASIC1.72□□□□□ -2.13
NID1P14543 uc_338.16-201ENST00000621804 95 ntBASIC1.72□□□□□ -2.13
NID1P14543 Y_RNA.118-201ENST00000363300 101 ntBASIC1.71□□□□□ -2.14
NID1P14543 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
NID1P14543 RNU6-614P-201ENST00000384369 107 ntBASIC1.71□□□□□ -2.14
NID1P14543 SNORA80D-201ENST00000384488 135 ntBASIC1.71□□□□□ -2.14
NID1P14543 NAMPTP3-201ENST00000569273 224 ntBASIC1.71□□□□□ -2.14
NID1P14543 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
NID1P14543 MIR3920-201ENST00000581751 86 ntBASIC1.71□□□□□ -2.14
NID1P14543 U6.59-201ENST00000615686 107 ntBASIC1.71□□□□□ -2.14
NID1P14543 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NID1P14543 MIR617-201ENST00000385030 97 ntBASIC1.7□□□□□ -2.14
NID1P14543 AC079150.2-201ENST00000443733 78 ntBASIC1.7□□□□□ -2.14
NID1P14543 RNU7-90P-201ENST00000459216 62 ntBASIC1.7□□□□□ -2.14
NID1P14543 AC073869.9-201ENST00000641610 120 ntBASIC1.7□□□□□ -2.14
NID1P14543 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NID1P14543 MIR1-1-201ENST00000362147 71 ntBASIC1.69□□□□□ -2.14
NID1P14543 MIR520F-201ENST00000384824 87 ntBASIC1.69□□□□□ -2.14
NID1P14543 RNU7-104P-201ENST00000459398 79 ntBASIC1.69□□□□□ -2.14
NID1P14543 RNU6-542P-201ENST00000516405 103 ntBASIC1.69□□□□□ -2.14
NID1P14543 RNU7-161P-201ENST00000517289 62 ntBASIC1.69□□□□□ -2.14
NID1P14543 MIR203A-201ENST00000384836 110 ntBASIC1.68□□□□□ -2.14
NID1P14543 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
NID1P14543 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
NID1P14543 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
NID1P14543 MIR548O2-201ENST00000616090 70 ntBASIC1.68□□□□□ -2.14
NID1P14543 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NID1P14543 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
NID1P14543 RNU1-78P-201ENST00000391248 165 ntBASIC1.67□□□□□ -2.14
NID1P14543 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.67□□□□□ -2.14
NID1P14543 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
NID1P14543 MIR4422-201ENST00000581938 83 ntBASIC1.67□□□□□ -2.14
NID1P14543 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
NID1P14543 MIR378A-201ENST00000362177 66 ntBASIC1.66□□□□□ -2.14
NID1P14543 Y_RNA.375-201ENST00000365625 101 ntBASIC1.66□□□□□ -2.14
NID1P14543 AC067940.1-201ENST00000458411 300 ntBASIC1.66□□□□□ -2.14
NID1P14543 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
NID1P14543 RNA5SP190-201ENST00000365222 118 ntBASIC1.65□□□□□ -2.15
NID1P14543 RNU6-54P-201ENST00000365563 107 ntBASIC1.65□□□□□ -2.15
NID1P14543 MIR519E-201ENST00000385075 84 ntBASIC1.65□□□□□ -2.15
NID1P14543 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
NID1P14543 SNORD79.1-201ENST00000516069 84 ntBASIC1.65□□□□□ -2.15
NID1P14543 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
NID1P14543 snoU13.31-201ENST00000607291 104 ntBASIC1.65□□□□□ -2.15
NID1P14543 AC067863.3-201ENST00000624172 122 ntBASIC1.65□□□□□ -2.15
NID1P14543 RNU1-123P-201ENST00000458950 160 ntBASIC1.64□□□□□ -2.15
NID1P14543 MIR3657-201ENST00000584818 117 ntBASIC1.64□□□□□ -2.15
NID1P14543 AC092634.7-201ENST00000621022 103 ntBASIC1.64□□□□□ -2.15
NID1P14543 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
NID1P14543 RNU6-645P-201ENST00000364649 106 ntBASIC1.63□□□□□ -2.15
NID1P14543 MIR7-2-201ENST00000384970 110 ntBASIC1.63□□□□□ -2.15
NID1P14543 RNU7-74P-201ENST00000459104 62 ntBASIC1.63□□□□□ -2.15
NID1P14543 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NID1P14543 SNORA25.5-201ENST00000363782 126 ntBASIC1.62□□□□□ -2.15
NID1P14543 RNU6-260P-201ENST00000384092 107 ntBASIC1.62□□□□□ -2.15
NID1P14543 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.62□□□□□ -2.15
NID1P14543 MIR1827-201ENST00000408549 66 ntBASIC1.62□□□□□ -2.15
NID1P14543 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
NID1P14543 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
NID1P14543 RNU6V-201ENST00000384105 107 ntBASIC1.61□□□□□ -2.15
NID1P14543 RNU6-321P-201ENST00000410912 106 ntBASIC1.61□□□□□ -2.15
NID1P14543 RNU6-902P-201ENST00000517212 91 ntBASIC1.61□□□□□ -2.15
NID1P14543 AL136317.1-201ENST00000612653 226 ntBASIC1.61□□□□□ -2.15
NID1P14543 RMST_2.1-201ENST00000617263 136 ntBASIC1.61□□□□□ -2.15
NID1P14543 AC084768.2-201ENST00000622736 221 ntBASIC1.61□□□□□ -2.15
NID1P14543 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
NID1P14543 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NID1P14543 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
NID1P14543 RNU6-135P-201ENST00000516769 101 ntBASIC1.6□□□□□ -2.15
NID1P14543 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NID1P14543 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
NID1P14543 SNORA2.1-201ENST00000363089 137 ntBASIC1.59□□□□□ -2.15
NID1P14543 RNU6-940P-201ENST00000363433 104 ntBASIC1.59□□□□□ -2.15
NID1P14543 RNA5SP117-201ENST00000365294 118 ntBASIC1.59□□□□□ -2.15
NID1P14543 RNU6-1335P-201ENST00000365426 107 ntBASIC1.59□□□□□ -2.15
NID1P14543 SNORD42B-201ENST00000458893 67 ntBASIC1.59□□□□□ -2.15
NID1P14543 MIR8070-201ENST00000616510 88 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms