Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.53□□□□□ -2.81
TPM1P09493 U6.96-201ENST00000636425 70 ntBASIC-2.53□□□□□ -2.81
TPM1P09493 MIR4795-201ENST00000584182 89 ntBASIC-2.54□□□□□ -2.82
TPM1P09493 RNU6-495P-201ENST00000362995 107 ntBASIC-2.55□□□□□ -2.82
TPM1P09493 RNY4P28-201ENST00000365281 93 ntBASIC-2.55□□□□□ -2.82
TPM1P09493 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.55□□□□□ -2.82
TPM1P09493 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.55□□□□□ -2.82
TPM1P09493 AC021146.9-201ENST00000512503 156 ntBASIC-2.55□□□□□ -2.82
TPM1P09493 AL353803.5-201ENST00000599815 141 ntBASIC-2.55□□□□□ -2.82
TPM1P09493 MIR6818-201ENST00000621576 65 ntBASIC-2.56□□□□□ -2.82
TPM1P09493 RNU6-363P-201ENST00000362895 105 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 RNU6-713P-201ENST00000384761 107 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 MIR527-201ENST00000385244 85 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 RNU6-576P-201ENST00000390854 102 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 MIR8485-201ENST00000401372 91 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 AL445584.3-201ENST00000617173 78 ntBASIC-2.57□□□□□ -2.82
TPM1P09493 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 MIR759-201ENST00000390224 91 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 Y_RNA.583-201ENST00000391033 113 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 RNU6-65P-201ENST00000516332 98 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 AC026421.1-201ENST00000519101 163 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 MIR4680-201ENST00000580906 66 ntBASIC-2.58□□□□□ -2.82
TPM1P09493 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.59□□□□□ -2.82
TPM1P09493 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.59□□□□□ -2.82
TPM1P09493 RNU6-474P-201ENST00000384243 107 ntBASIC-2.59□□□□□ -2.82
TPM1P09493 HLA-S-202ENST00000425174 53 ntBASIC-2.59□□□□□ -2.82
TPM1P09493 RBMX2P4-201ENST00000441256 376 ntBASIC-2.59□□□□□ -2.82
TPM1P09493 RNU6-746P-201ENST00000384112 109 ntBASIC-2.6□□□□□ -2.83
TPM1P09493 Y_RNA.514-201ENST00000384528 112 ntBASIC-2.6□□□□□ -2.83
TPM1P09493 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.6□□□□□ -2.83
TPM1P09493 MIR6888-201ENST00000621977 67 ntBASIC-2.6□□□□□ -2.83
TPM1P09493 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.6□□□□□ -2.83
TPM1P09493 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.61□□□□□ -2.83
TPM1P09493 Y_RNA.150-201ENST00000363562 102 ntBASIC-2.61□□□□□ -2.83
TPM1P09493 RNU6-990P-201ENST00000364385 104 ntBASIC-2.61□□□□□ -2.83
TPM1P09493 MIR4536-1-201ENST00000583537 88 ntBASIC-2.61□□□□□ -2.83
TPM1P09493 U6.104-201ENST00000637979 90 ntBASIC-2.61□□□□□ -2.83
TPM1P09493 RNU4-61P-201ENST00000411243 107 ntBASIC-2.62□□□□□ -2.83
TPM1P09493 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.62□□□□□ -2.83
TPM1P09493 RNA5SP67-201ENST00000516422 131 ntBASIC-2.62□□□□□ -2.83
TPM1P09493 SNORA63.2-201ENST00000362603 126 ntBASIC-2.63□□□□□ -2.83
TPM1P09493 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.63□□□□□ -2.83
TPM1P09493 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.63□□□□□ -2.83
TPM1P09493 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.63□□□□□ -2.83
TPM1P09493 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.63□□□□□ -2.83
TPM1P09493 AL442128.1-201ENST00000615151 90 ntBASIC-2.63□□□□□ -2.83
TPM1P09493 RNY1P11-201ENST00000363759 113 ntBASIC-2.64□□□□□ -2.83
TPM1P09493 RNU6-409P-201ENST00000384114 104 ntBASIC-2.64□□□□□ -2.83
TPM1P09493 SNORD63.1-201ENST00000516178 80 ntBASIC-2.64□□□□□ -2.83
TPM1P09493 AC090617.8-201ENST00000623339 167 ntBASIC-2.64□□□□□ -2.83
TPM1P09493 RNU6-924P-201ENST00000362926 108 ntBASIC-2.65□□□□□ -2.83
TPM1P09493 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.65□□□□□ -2.83
TPM1P09493 MIR548D2-201ENST00000384955 97 ntBASIC-2.65□□□□□ -2.83
TPM1P09493 RNU4-32P-201ENST00000363404 141 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 Y_RNA.452-201ENST00000384202 108 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 MT-TW-201ENST00000387382 68 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 MIR889-201ENST00000401280 79 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 MIR1302-6-201ENST00000408466 90 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 RNU2-51P-201ENST00000410708 197 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 RNU7-24P-201ENST00000458867 62 ntBASIC-2.66□□□□□ -2.84
TPM1P09493 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.67□□□□□ -2.84
TPM1P09493 SNORD115-33-201ENST00000363723 82 ntBASIC-2.67□□□□□ -2.84
TPM1P09493 Y_RNA.495-201ENST00000384435 112 ntBASIC-2.67□□□□□ -2.84
TPM1P09493 SNORA26.4-201ENST00000391188 123 ntBASIC-2.67□□□□□ -2.84
TPM1P09493 MIR5591-201ENST00000578248 65 ntBASIC-2.67□□□□□ -2.84
TPM1P09493 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.68□□□□□ -2.84
TPM1P09493 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.69□□□□□ -2.84
TPM1P09493 RNU6-312P-201ENST00000364629 107 ntBASIC-2.69□□□□□ -2.84
TPM1P09493 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.69□□□□□ -2.84
TPM1P09493 SNORD75.2-201ENST00000408784 58 ntBASIC-2.69□□□□□ -2.84
TPM1P09493 MIR4320-201ENST00000636981 65 ntBASIC-2.69□□□□□ -2.84
TPM1P09493 SNORD50.2-201ENST00000365465 70 ntBASIC-2.7□□□□□ -2.84
TPM1P09493 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.7□□□□□ -2.84
TPM1P09493 SNORD37.2-201ENST00000391075 66 ntBASIC-2.7□□□□□ -2.84
TPM1P09493 AC025521.1-201ENST00000621624 286 ntBASIC-2.7□□□□□ -2.84
TPM1P09493 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 MIR548A1-201ENST00000385041 97 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 MIR548H3-201ENST00000408771 118 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 SNORD127-201ENST00000458892 86 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 MIR3140-201ENST00000583685 90 ntBASIC-2.71□□□□□ -2.84
TPM1P09493 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.72□□□□□ -2.84
TPM1P09493 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.72□□□□□ -2.84
TPM1P09493 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.72□□□□□ -2.84
TPM1P09493 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 SNORA24B-201ENST00000384176 131 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 RNU6-985P-201ENST00000410182 104 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 RNA5SP136-201ENST00000410906 107 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 MIR4770-201ENST00000579149 58 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 MIR4520-1-201ENST00000582609 70 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 MIR8062-201ENST00000621515 85 ntBASIC-2.73□□□□□ -2.85
TPM1P09493 MT-TD-201ENST00000387419 68 ntBASIC-2.74□□□□□ -2.85
TPM1P09493 MIR548U-201ENST00000390728 81 ntBASIC-2.74□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 252.1 ms