Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 MIR221-201ENST00000385135 110 ntBASIC2.98□□□□□ -1.93
MYCNP04198 AC002350.1-201ENST00000490759 375 ntBASIC2.98□□□□□ -1.93
MYCNP04198 RNA5SP402-201ENST00000517148 110 ntBASIC2.98□□□□□ -1.93
MYCNP04198 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MYCNP04198 RNU1-141P-201ENST00000364623 158 ntBASIC2.97□□□□□ -1.93
MYCNP04198 SNORD28-201ENST00000384706 75 ntBASIC2.97□□□□□ -1.93
MYCNP04198 MIR17-201ENST00000385012 84 ntBASIC2.97□□□□□ -1.93
MYCNP04198 MIR4781-201ENST00000585250 76 ntBASIC2.97□□□□□ -1.93
MYCNP04198 U2.7-201ENST00000619197 100 ntBASIC2.97□□□□□ -1.93
MYCNP04198 RNU5B-6P-201ENST00000516765 68 ntBASIC2.96□□□□□ -1.94
MYCNP04198 MIR3198-2-201ENST00000577868 80 ntBASIC2.96□□□□□ -1.94
MYCNP04198 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.95□□□□□ -1.94
MYCNP04198 MIR6895-201ENST00000613497 78 ntBASIC2.95□□□□□ -1.94
MYCNP04198 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.95□□□□□ -1.94
MYCNP04198 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.95□□□□□ -1.94
MYCNP04198 U4.4-201ENST00000620626 117 ntBASIC2.95□□□□□ -1.94
MYCNP04198 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
MYCNP04198 RNU4-53P-201ENST00000410828 140 ntBASIC2.94□□□□□ -1.94
MYCNP04198 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MYCNP04198 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.93□□□□□ -1.94
MYCNP04198 SNORA15B-2-201ENST00000384058 135 ntBASIC2.93□□□□□ -1.94
MYCNP04198 SNORA15B-1-201ENST00000384334 135 ntBASIC2.93□□□□□ -1.94
MYCNP04198 RNU1-78P-201ENST00000391248 165 ntBASIC2.93□□□□□ -1.94
MYCNP04198 RNU7-119P-201ENST00000459279 63 ntBASIC2.93□□□□□ -1.94
MYCNP04198 RNA5SP320-201ENST00000516263 124 ntBASIC2.93□□□□□ -1.94
MYCNP04198 MIR4422-201ENST00000581938 83 ntBASIC2.93□□□□□ -1.94
MYCNP04198 MIR6840-201ENST00000611937 71 ntBASIC2.93□□□□□ -1.94
MYCNP04198 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
MYCNP04198 DEFA7P-201ENST00000382676 285 ntBASIC2.92□□□□□ -1.94
MYCNP04198 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MYCNP04198 snoU13.15-201ENST00000459407 104 ntBASIC2.92□□□□□ -1.94
MYCNP04198 AC079804.2-201ENST00000490376 200 ntBASIC2.92□□□□□ -1.94
MYCNP04198 AL137847.3-201ENST00000611521 109 ntBASIC2.92□□□□□ -1.94
MYCNP04198 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MYCNP04198 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
MYCNP04198 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
MYCNP04198 RNU6-716P-201ENST00000365621 103 ntBASIC2.91□□□□□ -1.94
MYCNP04198 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.91□□□□□ -1.94
MYCNP04198 RNU6-726P-201ENST00000364680 107 ntBASIC2.9□□□□□ -1.95
MYCNP04198 RNA5SP425-201ENST00000410336 112 ntBASIC2.9□□□□□ -1.95
MYCNP04198 HMGN2P19-201ENST00000425149 265 ntBASIC2.9□□□□□ -1.95
MYCNP04198 RPS29P6-201ENST00000438196 145 ntBASIC2.9□□□□□ -1.95
MYCNP04198 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.9□□□□□ -1.95
MYCNP04198 Z82195.2-201ENST00000612348 18351 ntBASIC2.89□□□□□ -1.95
MYCNP04198 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.89□□□□□ -1.95
MYCNP04198 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
MYCNP04198 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
MYCNP04198 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
MYCNP04198 SNORA33.1-201ENST00000364957 130 ntBASIC2.88□□□□□ -1.95
MYCNP04198 MIR144-201ENST00000384886 86 ntBASIC2.88□□□□□ -1.95
MYCNP04198 RNA5SP181-201ENST00000410246 98 ntBASIC2.88□□□□□ -1.95
MYCNP04198 Y_RNA.125-201ENST00000363371 111 ntBASIC2.87□□□□□ -1.95
MYCNP04198 MIR758-201ENST00000390227 88 ntBASIC2.87□□□□□ -1.95
MYCNP04198 MIR1289-2-201ENST00000408360 111 ntBASIC2.87□□□□□ -1.95
MYCNP04198 SNORA70.22-201ENST00000517160 124 ntBASIC2.87□□□□□ -1.95
MYCNP04198 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MYCNP04198 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
MYCNP04198 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
MYCNP04198 MIR4648-201ENST00000580107 72 ntBASIC2.85□□□□□ -1.95
MYCNP04198 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.84□□□□□ -1.95
MYCNP04198 SNORA8.2-201ENST00000384372 139 ntBASIC2.84□□□□□ -1.95
MYCNP04198 RNU6-269P-201ENST00000391077 97 ntBASIC2.84□□□□□ -1.95
MYCNP04198 AL591806.2-201ENST00000433122 173 ntBASIC2.84□□□□□ -1.95
MYCNP04198 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.84□□□□□ -1.95
MYCNP04198 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
MYCNP04198 SNORD18A-201ENST00000363753 72 ntBASIC2.83□□□□□ -1.96
MYCNP04198 RN7SKP223-201ENST00000410582 62 ntBASIC2.83□□□□□ -1.96
MYCNP04198 RNA5SP484-201ENST00000458857 111 ntBASIC2.83□□□□□ -1.96
MYCNP04198 RNA5SP282-201ENST00000516355 108 ntBASIC2.83□□□□□ -1.96
MYCNP04198 RNA5SP47-201ENST00000517230 109 ntBASIC2.83□□□□□ -1.96
MYCNP04198 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MYCNP04198 MIR6073-201ENST00000352083 89 ntBASIC2.82□□□□□ -1.96
MYCNP04198 Y_RNA.246-201ENST00000364495 108 ntBASIC2.82□□□□□ -1.96
MYCNP04198 SNORA63.6-201ENST00000364921 119 ntBASIC2.82□□□□□ -1.96
MYCNP04198 RNA5SP210-201ENST00000391034 120 ntBASIC2.82□□□□□ -1.96
MYCNP04198 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.82□□□□□ -1.96
MYCNP04198 AC015712.3-201ENST00000559380 164 ntBASIC2.82□□□□□ -1.96
MYCNP04198 MIR5694-201ENST00000581190 76 ntBASIC2.82□□□□□ -1.96
MYCNP04198 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
MYCNP04198 RNA5SP99-201ENST00000364020 114 ntBASIC2.81□□□□□ -1.96
MYCNP04198 MIR222-201ENST00000384992 110 ntBASIC2.81□□□□□ -1.96
MYCNP04198 MIR764-201ENST00000390811 85 ntBASIC2.81□□□□□ -1.96
MYCNP04198 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.81□□□□□ -1.96
MYCNP04198 Y_RNA.633-201ENST00000459107 95 ntBASIC2.81□□□□□ -1.96
MYCNP04198 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MYCNP04198 SNORD12-201ENST00000391002 90 ntBASIC2.8□□□□□ -1.96
MYCNP04198 MIR6873-201ENST00000622788 63 ntBASIC2.8□□□□□ -1.96
MYCNP04198 SNORA41B-201ENST00000384785 128 ntBASIC2.79□□□□□ -1.96
MYCNP04198 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
MYCNP04198 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MYCNP04198 snoU13.23-201ENST00000458863 104 ntBASIC2.79□□□□□ -1.96
MYCNP04198 AC008834.1-201ENST00000511612 175 ntBASIC2.79□□□□□ -1.96
MYCNP04198 RNU6-231P-201ENST00000517122 103 ntBASIC2.79□□□□□ -1.96
MYCNP04198 AC046143.2-201ENST00000609789 160 ntBASIC2.78□□□□□ -1.96
MYCNP04198 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
MYCNP04198 SNORD89-201ENST00000390981 114 ntBASIC2.77□□□□□ -1.97
MYCNP04198 RNA5SP233-201ENST00000459153 113 ntBASIC2.77□□□□□ -1.97
MYCNP04198 SCARNA17.3-201ENST00000516381 125 ntBASIC2.77□□□□□ -1.97
MYCNP04198 MIR676-201ENST00000390702 67 ntBASIC2.76□□□□□ -1.97
MYCNP04198 RNU6-980P-201ENST00000516925 103 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms