Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
SPDEFO95238 MIR3920-201ENST00000581751 86 ntBASIC0.91□□□□□ -2.26
SPDEFO95238 RNU6-1051P-201ENST00000365471 102 ntBASIC0.9□□□□□ -2.27
SPDEFO95238 RNU6-857P-201ENST00000515893 110 ntBASIC0.9□□□□□ -2.27
SPDEFO95238 AC011195.1-201ENST00000578177 177 ntBASIC0.9□□□□□ -2.27
SPDEFO95238 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.9□□□□□ -2.27
SPDEFO95238 AC244669.1-204ENST00000621564 178 ntBASIC0.9□□□□□ -2.27
SPDEFO95238 AC067863.3-201ENST00000624172 122 ntBASIC0.9□□□□□ -2.27
SPDEFO95238 RNU6-1229P-201ENST00000364295 107 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 RNU6-1126P-201ENST00000384002 107 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 MIR451A-201ENST00000385059 72 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 MIR2113-201ENST00000459007 91 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 Y_RNA.660-201ENST00000516002 120 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 RNA5SP47-201ENST00000517230 109 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 MIR548AG2-201ENST00000581228 64 ntBASIC0.89□□□□□ -2.27
SPDEFO95238 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
SPDEFO95238 MIR18A-201ENST00000362310 71 ntBASIC0.88□□□□□ -2.27
SPDEFO95238 RNY4P3-201ENST00000365254 95 ntBASIC0.88□□□□□ -2.27
SPDEFO95238 RNU6-24P-201ENST00000384440 107 ntBASIC0.88□□□□□ -2.27
SPDEFO95238 SNORD77.2-201ENST00000391045 68 ntBASIC0.88□□□□□ -2.27
SPDEFO95238 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.88□□□□□ -2.27
SPDEFO95238 RNU6-1057P-201ENST00000517162 102 ntBASIC0.88□□□□□ -2.27
SPDEFO95238 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.88□□□□□ -2.27
SPDEFO95238 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.88□□□□□ -2.27
SPDEFO95238 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SPDEFO95238 RNA5SP432-201ENST00000362480 116 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 RNU5F-1-201ENST00000362507 117 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 RNU6-161P-201ENST00000363051 106 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 RNU6-686P-201ENST00000364839 107 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 SNORA25.9-201ENST00000365087 128 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 RNU4-45P-201ENST00000365469 141 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 RNU6-1108P-201ENST00000516308 104 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.87□□□□□ -2.27
SPDEFO95238 MIR4769-201ENST00000584126 77 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 AL353765.1-201ENST00000605514 183 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 snoU13.31-201ENST00000607291 104 ntBASIC0.87□□□□□ -2.27
SPDEFO95238 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SPDEFO95238 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPDEFO95238 MIRLET7A1-201ENST00000362295 80 ntBASIC0.86□□□□□ -2.27
SPDEFO95238 SNORD41.1-201ENST00000391000 69 ntBASIC0.86□□□□□ -2.27
SPDEFO95238 snoU13.17-201ENST00000458802 104 ntBASIC0.86□□□□□ -2.27
SPDEFO95238 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.86□□□□□ -2.27
SPDEFO95238 MIR3140-201ENST00000583685 90 ntBASIC0.86□□□□□ -2.27
SPDEFO95238 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
SPDEFO95238 RNU6-208P-201ENST00000362431 107 ntBASIC0.85□□□□□ -2.27
SPDEFO95238 Y_RNA.264-201ENST00000364665 102 ntBASIC0.85□□□□□ -2.27
SPDEFO95238 MIR617-201ENST00000385030 97 ntBASIC0.85□□□□□ -2.27
SPDEFO95238 U3.27-201ENST00000391237 200 ntBASIC0.85□□□□□ -2.27
SPDEFO95238 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
SPDEFO95238 SCARNA16.5-201ENST00000517114 183 ntBASIC0.85□□□□□ -2.27
SPDEFO95238 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SPDEFO95238 Y_RNA.244-201ENST00000364484 109 ntBASIC0.84□□□□□ -2.27
SPDEFO95238 RNU6-726P-201ENST00000364680 107 ntBASIC0.84□□□□□ -2.27
SPDEFO95238 SNORA24B-201ENST00000384176 131 ntBASIC0.84□□□□□ -2.27
SPDEFO95238 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.84□□□□□ -2.27
SPDEFO95238 MIR519E-201ENST00000385075 84 ntBASIC0.83□□□□□ -2.28
SPDEFO95238 RNU6-237P-201ENST00000515985 71 ntBASIC0.83□□□□□ -2.28
SPDEFO95238 MIR6828-201ENST00000636181 60 ntBASIC0.83□□□□□ -2.28
SPDEFO95238 RNU6-1094P-201ENST00000362416 104 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 Y_RNA.327-201ENST00000365201 102 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 MIR216B-201ENST00000390186 82 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 MIR548L-201ENST00000408303 86 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 RNU6-1052P-201ENST00000411398 104 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 RNU7-74P-201ENST00000459104 62 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 RNU6-719P-201ENST00000516671 104 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.82□□□□□ -2.28
SPDEFO95238 RNU6-392P-201ENST00000364926 101 ntBASIC0.81□□□□□ -2.28
SPDEFO95238 RNU6-716P-201ENST00000365621 103 ntBASIC0.81□□□□□ -2.28
SPDEFO95238 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SPDEFO95238 RNU6-380P-201ENST00000410207 107 ntBASIC0.81□□□□□ -2.28
SPDEFO95238 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.81□□□□□ -2.28
SPDEFO95238 RNA5SP94-201ENST00000516917 108 ntBASIC0.81□□□□□ -2.28
SPDEFO95238 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
SPDEFO95238 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
SPDEFO95238 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
SPDEFO95238 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
SPDEFO95238 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SPDEFO95238 Y_RNA.12-201ENST00000362393 112 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 RNU2-59P-201ENST00000410482 191 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.79□□□□□ -2.28
SPDEFO95238 AC097510.1-201ENST00000510945 133 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 MIR4498-201ENST00000577599 66 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 YWHAEP2-201ENST00000580066 112 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 YWHAEP3-201ENST00000582767 121 ntBASIC0.79□□□□□ -2.28
SPDEFO95238 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
SPDEFO95238 Y_RNA.532-201ENST00000384590 113 ntBASIC0.78□□□□□ -2.28
SPDEFO95238 AC093423.1-201ENST00000440817 142 ntBASIC0.78□□□□□ -2.28
SPDEFO95238 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
SPDEFO95238 RNA5SP268-201ENST00000516828 124 ntBASIC0.78□□□□□ -2.28
SPDEFO95238 RNU6-303P-201ENST00000517091 106 ntBASIC0.78□□□□□ -2.28
SPDEFO95238 RNU6-1177P-201ENST00000391058 104 ntBASIC0.77□□□□□ -2.29
SPDEFO95238 U6.81-201ENST00000612550 106 ntBASIC0.77□□□□□ -2.29
SPDEFO95238 MIR548O2-201ENST00000616090 70 ntBASIC0.77□□□□□ -2.29
SPDEFO95238 AL162376.1-201ENST00000624117 175 ntBASIC0.77□□□□□ -2.29
SPDEFO95238 MIR1297-201ENST00000637311 77 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms