Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 AC079804.2-201ENST00000490376 200 ntBASIC3.08□□□□□ -1.92
NPM3O75607 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
NPM3O75607 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPM3O75607 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPM3O75607 Y_RNA.633-201ENST00000459107 95 ntBASIC3.07□□□□□ -1.92
NPM3O75607 RNA5SP320-201ENST00000516263 124 ntBASIC3.07□□□□□ -1.92
NPM3O75607 RNA5SP47-201ENST00000517230 109 ntBASIC3.07□□□□□ -1.92
NPM3O75607 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
NPM3O75607 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPM3O75607 RNU6-716P-201ENST00000365621 103 ntBASIC3.06□□□□□ -1.92
NPM3O75607 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NPM3O75607 SNORA63.6-201ENST00000364921 119 ntBASIC3.05□□□□□ -1.92
NPM3O75607 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
NPM3O75607 SNORD18A-201ENST00000363753 72 ntBASIC3.04□□□□□ -1.92
NPM3O75607 Y_RNA.246-201ENST00000364495 108 ntBASIC3.04□□□□□ -1.92
NPM3O75607 SNORA33.1-201ENST00000364957 130 ntBASIC3.04□□□□□ -1.92
NPM3O75607 RNA5SP508-201ENST00000411327 119 ntBASIC3.04□□□□□ -1.92
NPM3O75607 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.04□□□□□ -1.92
NPM3O75607 RNU6-269P-201ENST00000391077 97 ntBASIC3.03□□□□□ -1.92
NPM3O75607 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NPM3O75607 RNA5SP24-201ENST00000516478 95 ntBASIC3.02□□□□□ -1.93
NPM3O75607 SNORD53-201ENST00000579969 78 ntBASIC3.02□□□□□ -1.93
NPM3O75607 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPM3O75607 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPM3O75607 SCARNA17.3-201ENST00000516381 125 ntBASIC3.01□□□□□ -1.93
NPM3O75607 RNU6-1110P-201ENST00000516462 101 ntBASIC3.01□□□□□ -1.93
NPM3O75607 AC015712.3-201ENST00000559380 164 ntBASIC3.01□□□□□ -1.93
NPM3O75607 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NPM3O75607 AL356379.1-201ENST00000414105 126 ntBASIC3□□□□□ -1.93
NPM3O75607 RNA5SP456-201ENST00000364002 114 ntBASIC2.99□□□□□ -1.93
NPM3O75607 SNORA70B-201ENST00000384210 135 ntBASIC2.99□□□□□ -1.93
NPM3O75607 MIR517C-201ENST00000385103 95 ntBASIC2.99□□□□□ -1.93
NPM3O75607 RNA5SP489-201ENST00000410986 109 ntBASIC2.99□□□□□ -1.93
NPM3O75607 RNA5SP484-201ENST00000458857 111 ntBASIC2.99□□□□□ -1.93
NPM3O75607 RNU6-231P-201ENST00000517122 103 ntBASIC2.99□□□□□ -1.93
NPM3O75607 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.99□□□□□ -1.93
NPM3O75607 Y_RNA.407-201ENST00000383986 113 ntBASIC2.98□□□□□ -1.93
NPM3O75607 MIR222-201ENST00000384992 110 ntBASIC2.98□□□□□ -1.93
NPM3O75607 SNORA3.2-201ENST00000408221 125 ntBASIC2.98□□□□□ -1.93
NPM3O75607 RNA5SP380-201ENST00000517190 98 ntBASIC2.98□□□□□ -1.93
NPM3O75607 MIR5092-201ENST00000583139 88 ntBASIC2.98□□□□□ -1.93
NPM3O75607 AL096840.1-201ENST00000603287 93 ntBASIC2.98□□□□□ -1.93
NPM3O75607 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.98□□□□□ -1.93
NPM3O75607 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.98□□□□□ -1.93
NPM3O75607 SNORD105-201ENST00000386910 85 ntBASIC2.97□□□□□ -1.93
NPM3O75607 RNU6-980P-201ENST00000516925 103 ntBASIC2.97□□□□□ -1.93
NPM3O75607 RNA5SP289-201ENST00000362332 137 ntBASIC2.96□□□□□ -1.94
NPM3O75607 SNORA25.8-201ENST00000364831 128 ntBASIC2.96□□□□□ -1.94
NPM3O75607 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
NPM3O75607 AC008413.1-201ENST00000511864 177 ntBASIC2.96□□□□□ -1.94
NPM3O75607 RNU1-92P-201ENST00000517017 135 ntBASIC2.96□□□□□ -1.94
NPM3O75607 SCARNA16.5-201ENST00000517114 183 ntBASIC2.96□□□□□ -1.94
NPM3O75607 SNORA41B-201ENST00000384785 128 ntBASIC2.95□□□□□ -1.94
NPM3O75607 RNU4-53P-201ENST00000410828 140 ntBASIC2.95□□□□□ -1.94
NPM3O75607 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.95□□□□□ -1.94
NPM3O75607 SNORD89-201ENST00000390981 114 ntBASIC2.94□□□□□ -1.94
NPM3O75607 MIR3678-201ENST00000578455 94 ntBASIC2.94□□□□□ -1.94
NPM3O75607 AL356320.1-201ENST00000429616 163 ntBASIC2.93□□□□□ -1.94
NPM3O75607 FABP5P4-201ENST00000437203 171 ntBASIC2.93□□□□□ -1.94
NPM3O75607 AC002429.1-201ENST00000437672 148 ntBASIC2.93□□□□□ -1.94
NPM3O75607 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NPM3O75607 Y_RNA.325-201ENST00000365171 122 ntBASIC2.92□□□□□ -1.94
NPM3O75607 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NPM3O75607 MIR1261-201ENST00000408659 82 ntBASIC2.91□□□□□ -1.94
NPM3O75607 U7.7-201ENST00000459276 60 ntBASIC2.91□□□□□ -1.94
NPM3O75607 RNA5SP82-201ENST00000516707 92 ntBASIC2.91□□□□□ -1.94
NPM3O75607 AL049779.4-201ENST00000604500 156 ntBASIC2.91□□□□□ -1.94
NPM3O75607 MIR6895-201ENST00000613497 78 ntBASIC2.91□□□□□ -1.94
NPM3O75607 MIR1291-201ENST00000627649 87 ntBASIC2.91□□□□□ -1.94
NPM3O75607 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
NPM3O75607 RNU4-33P-201ENST00000364316 85 ntBASIC2.9□□□□□ -1.95
NPM3O75607 MIR652-201ENST00000385278 98 ntBASIC2.9□□□□□ -1.95
NPM3O75607 MIR676-201ENST00000390702 67 ntBASIC2.9□□□□□ -1.95
NPM3O75607 MIR6840-201ENST00000611937 71 ntBASIC2.9□□□□□ -1.95
NPM3O75607 AL162376.1-201ENST00000624117 175 ntBASIC2.9□□□□□ -1.95
NPM3O75607 RNA5SP432-201ENST00000362480 116 ntBASIC2.89□□□□□ -1.95
NPM3O75607 RNA5SP425-201ENST00000410336 112 ntBASIC2.89□□□□□ -1.95
NPM3O75607 AL021921.1-201ENST00000442774 93 ntBASIC2.89□□□□□ -1.95
NPM3O75607 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
NPM3O75607 SNORD116.2-201ENST00000391251 93 ntBASIC2.88□□□□□ -1.95
NPM3O75607 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NPM3O75607 SNORA9.1-201ENST00000362412 131 ntBASIC2.87□□□□□ -1.95
NPM3O75607 RNU6-930P-201ENST00000390938 100 ntBASIC2.87□□□□□ -1.95
NPM3O75607 RN7SKP223-201ENST00000410582 62 ntBASIC2.87□□□□□ -1.95
NPM3O75607 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPM3O75607 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NPM3O75607 MIR5007-201ENST00000583098 95 ntBASIC2.86□□□□□ -1.95
NPM3O75607 AC046143.2-201ENST00000609789 160 ntBASIC2.86□□□□□ -1.95
NPM3O75607 U6.96-201ENST00000636425 70 ntBASIC2.86□□□□□ -1.95
NPM3O75607 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
NPM3O75607 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
NPM3O75607 RNU6-35P-201ENST00000384530 107 ntBASIC2.85□□□□□ -1.95
NPM3O75607 AC026436.1-201ENST00000510537 270 ntBASIC2.85□□□□□ -1.95
NPM3O75607 CYP3A54P-201ENST00000566950 75 ntBASIC2.85□□□□□ -1.95
NPM3O75607 MIR1273D-201ENST00000577266 86 ntBASIC2.85□□□□□ -1.95
NPM3O75607 MIR3124-201ENST00000582636 67 ntBASIC2.85□□□□□ -1.95
NPM3O75607 AC104984.5-201ENST00000586878 94 ntBASIC2.85□□□□□ -1.95
NPM3O75607 AC010297.1-201ENST00000623948 149 ntBASIC2.85□□□□□ -1.95
NPM3O75607 snoU13.15-201ENST00000459407 104 ntBASIC2.84□□□□□ -1.95
NPM3O75607 MIR4648-201ENST00000580107 72 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms