Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU7-102P-201ENST00000458948 62 ntBASIC2.24□□□□□ -2.05
GFRA3O60609 SNORA31.11-201ENST00000516528 139 ntBASIC2.24□□□□□ -2.05
GFRA3O60609 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
GFRA3O60609 RNU6-822P-201ENST00000362707 106 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 SNORD114-26-201ENST00000363543 72 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 SNORD113.3-201ENST00000364630 78 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 RPS26P5-201ENST00000418544 335 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 AC036111.3-201ENST00000526389 112 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 AC027335.2-201ENST00000624030 375 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 AC067863.3-201ENST00000624172 122 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
GFRA3O60609 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
GFRA3O60609 Y_RNA.374-201ENST00000365606 101 ntBASIC2.22□□□□□ -2.05
GFRA3O60609 U8.9-201ENST00000365667 134 ntBASIC2.22□□□□□ -2.05
GFRA3O60609 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
GFRA3O60609 SNORA31.2-201ENST00000516019 134 ntBASIC2.22□□□□□ -2.05
GFRA3O60609 MIR4460-201ENST00000577862 86 ntBASIC2.22□□□□□ -2.05
GFRA3O60609 BX248123.2-201ENST00000606318 124 ntBASIC2.22□□□□□ -2.05
GFRA3O60609 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.22□□□□□ -2.05
GFRA3O60609 RNU6-246P-201ENST00000384702 107 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 MIR627-201ENST00000384979 97 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 MIR527-201ENST00000385244 85 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 RNA5SP210-201ENST00000391034 120 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 JTBP1-201ENST00000441314 247 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 CYP3A54P-201ENST00000566950 75 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 MIR6504-201ENST00000613520 61 ntBASIC2.21□□□□□ -2.06
GFRA3O60609 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
GFRA3O60609 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
GFRA3O60609 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
GFRA3O60609 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
GFRA3O60609 DEFA7P-201ENST00000382676 285 ntBASIC2.2□□□□□ -2.06
GFRA3O60609 MIR938-201ENST00000401216 83 ntBASIC2.2□□□□□ -2.06
GFRA3O60609 AP1B1P2-201ENST00000416196 106 ntBASIC2.2□□□□□ -2.06
GFRA3O60609 RNU7-40P-201ENST00000516397 64 ntBASIC2.2□□□□□ -2.06
GFRA3O60609 MIR6734-201ENST00000621166 68 ntBASIC2.2□□□□□ -2.06
GFRA3O60609 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
GFRA3O60609 RNU6-1204P-201ENST00000363948 107 ntBASIC2.19□□□□□ -2.06
GFRA3O60609 SNORD41.1-201ENST00000391000 69 ntBASIC2.19□□□□□ -2.06
GFRA3O60609 MIR1276-201ENST00000408707 83 ntBASIC2.19□□□□□ -2.06
GFRA3O60609 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.19□□□□□ -2.06
GFRA3O60609 RNA5SP94-201ENST00000516917 108 ntBASIC2.19□□□□□ -2.06
GFRA3O60609 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.19□□□□□ -2.06
GFRA3O60609 MIR548AG1-201ENST00000579932 66 ntBASIC2.19□□□□□ -2.06
GFRA3O60609 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GFRA3O60609 Z82195.2-201ENST00000612348 18351 ntBASIC2.18□□□□□ -2.06
GFRA3O60609 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GFRA3O60609 RNA5SP492-201ENST00000411330 114 ntBASIC2.18□□□□□ -2.06
GFRA3O60609 AL021921.1-201ENST00000442774 93 ntBASIC2.18□□□□□ -2.06
GFRA3O60609 RNU7-56P-201ENST00000458744 62 ntBASIC2.18□□□□□ -2.06
GFRA3O60609 RNU5B-6P-201ENST00000516765 68 ntBASIC2.18□□□□□ -2.06
GFRA3O60609 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GFRA3O60609 RNU6-59P-201ENST00000384787 107 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 MIR517C-201ENST00000385103 95 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 MIR758-201ENST00000390227 88 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 AC092427.1-202ENST00000430569 476 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 Z96811.1-201ENST00000445880 108 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 RNA5SP220-201ENST00000516298 104 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 MIR5092-201ENST00000583139 88 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.17□□□□□ -2.06
GFRA3O60609 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
GFRA3O60609 Y_RNA.174-201ENST00000363781 105 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 SNORD56.5-201ENST00000364281 72 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 RNU1-141P-201ENST00000364623 158 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 RNA5SP190-201ENST00000365222 118 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 SNORD28-201ENST00000384706 75 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 RNU4-62P-201ENST00000410125 130 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 SNORD13-201ENST00000459299 104 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 RNU6-1206P-201ENST00000516339 103 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 MIR4804-201ENST00000581683 73 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 RMST_2.1-201ENST00000617263 136 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.16□□□□□ -2.06
GFRA3O60609 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
GFRA3O60609 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
GFRA3O60609 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
GFRA3O60609 Y_RNA.109-201ENST00000363215 102 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 SNORA63.6-201ENST00000364921 119 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 RNU6-742P-201ENST00000365289 107 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 RNU6-721P-201ENST00000410155 105 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 RNU6-518P-201ENST00000516056 96 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.15□□□□□ -2.07
GFRA3O60609 MIR3670-2-201ENST00000582974 65 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 MIR3670-1-201ENST00000584160 65 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 MIR3670-3-201ENST00000584855 65 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 MIR3670-4-201ENST00000612260 65 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 AC090617.8-201ENST00000623339 167 ntBASIC2.15□□□□□ -2.07
GFRA3O60609 MIR582-201ENST00000365731 98 ntBASIC2.14□□□□□ -2.07
GFRA3O60609 MIR519A2-201ENST00000384990 87 ntBASIC2.14□□□□□ -2.07
GFRA3O60609 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
GFRA3O60609 SNORA77B-201ENST00000578179 125 ntBASIC2.14□□□□□ -2.07
GFRA3O60609 MIR3664-201ENST00000579074 99 ntBASIC2.14□□□□□ -2.07
GFRA3O60609 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
GFRA3O60609 RNU6-1008P-201ENST00000384160 104 ntBASIC2.13□□□□□ -2.07
GFRA3O60609 RNU6-439P-201ENST00000384188 106 ntBASIC2.13□□□□□ -2.07
GFRA3O60609 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
GFRA3O60609 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms