Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 AC068338.1-201ENST00000565567 176 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 AC140658.3-201ENST00000567603 271 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 MIR4666B-201ENST00000578142 81 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 MIR4796-201ENST00000580742 81 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 MIR4639-201ENST00000584938 69 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
HOXA3O43365 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
HOXA3O43365 RNU6-787P-201ENST00000384032 107 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 Y_RNA.437-201ENST00000384113 113 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 RNU7-13P-201ENST00000516413 62 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 AL353765.1-201ENST00000605514 183 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 AC244669.1-204ENST00000621564 178 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 AC067863.3-201ENST00000624172 122 ntBASIC0.93□□□□□ -2.26
HOXA3O43365 MIR18A-201ENST00000362310 71 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 SNORD114-26-201ENST00000363543 72 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 SNORD18A-201ENST00000363753 72 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 Y_RNA.207-201ENST00000364142 106 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 SNORD78.1-201ENST00000390866 65 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 RNU7-104P-201ENST00000459398 79 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 RNU6-287P-201ENST00000516230 98 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 MIR3920-201ENST00000581751 86 ntBASIC0.92□□□□□ -2.26
HOXA3O43365 RNU6-1229P-201ENST00000364295 107 ntBASIC0.91□□□□□ -2.26
HOXA3O43365 RNU1-93P-201ENST00000364704 169 ntBASIC0.91□□□□□ -2.26
HOXA3O43365 SNORD115-44-201ENST00000365391 82 ntBASIC0.91□□□□□ -2.26
HOXA3O43365 RNU6-1124P-201ENST00000384169 107 ntBASIC0.91□□□□□ -2.26
HOXA3O43365 Y_RNA.540-201ENST00000384638 111 ntBASIC0.91□□□□□ -2.26
HOXA3O43365 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
HOXA3O43365 MIR3202-2-201ENST00000635980 79 ntBASIC0.91□□□□□ -2.26
HOXA3O43365 Y_RNA.36-201ENST00000362602 112 ntBASIC0.9□□□□□ -2.27
HOXA3O43365 Y_RNA.313-201ENST00000365095 103 ntBASIC0.9□□□□□ -2.27
HOXA3O43365 RNU6-652P-201ENST00000365488 107 ntBASIC0.9□□□□□ -2.27
HOXA3O43365 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
HOXA3O43365 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
HOXA3O43365 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
HOXA3O43365 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HOXA3O43365 RNU6-228P-201ENST00000362700 106 ntBASIC0.89□□□□□ -2.27
HOXA3O43365 RNU6-624P-201ENST00000363411 107 ntBASIC0.89□□□□□ -2.27
HOXA3O43365 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
HOXA3O43365 RPS29P1-201ENST00000465274 159 ntBASIC0.89□□□□□ -2.27
HOXA3O43365 AC022709.1-201ENST00000615967 87 ntBASIC0.89□□□□□ -2.27
HOXA3O43365 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 SNORD90-201ENST00000391145 111 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 MIR1255A-201ENST00000408338 113 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 MIR1285-1-201ENST00000408593 84 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 RNU6-935P-201ENST00000410371 100 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
HOXA3O43365 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.88□□□□□ -2.27
HOXA3O43365 Y_RNA.316-201ENST00000365118 111 ntBASIC0.87□□□□□ -2.27
HOXA3O43365 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
HOXA3O43365 MIR598-201ENST00000384868 97 ntBASIC0.87□□□□□ -2.27
HOXA3O43365 Y_RNA.685-201ENST00000516532 108 ntBASIC0.87□□□□□ -2.27
HOXA3O43365 RNU6-1057P-201ENST00000517162 102 ntBASIC0.87□□□□□ -2.27
HOXA3O43365 MIR548AG2-201ENST00000581228 64 ntBASIC0.87□□□□□ -2.27
HOXA3O43365 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.87□□□□□ -2.27
HOXA3O43365 SNORA63.2-201ENST00000362603 126 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 RNU6-1051P-201ENST00000365471 102 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 RNU6-1126P-201ENST00000384002 107 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 AL450471.1-201ENST00000447509 127 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 MIR2113-201ENST00000459007 91 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 MIR151B-201ENST00000584249 96 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
HOXA3O43365 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
HOXA3O43365 RNU6-726P-201ENST00000364680 107 ntBASIC0.85□□□□□ -2.27
HOXA3O43365 RNU6-129P-201ENST00000391022 107 ntBASIC0.85□□□□□ -2.27
HOXA3O43365 MIR548L-201ENST00000408303 86 ntBASIC0.85□□□□□ -2.27
HOXA3O43365 RNU6-1052P-201ENST00000411398 104 ntBASIC0.85□□□□□ -2.27
HOXA3O43365 RNU6-719P-201ENST00000516671 104 ntBASIC0.85□□□□□ -2.27
HOXA3O43365 RNY4P3-201ENST00000365254 95 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 MIR617-201ENST00000385030 97 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 MIR451A-201ENST00000385059 72 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 SNORD41.1-201ENST00000391000 69 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 RNU6-1275P-201ENST00000391087 107 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 FGF7P7-201ENST00000514120 227 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 MIR3140-201ENST00000583685 90 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 MIR6779-201ENST00000617283 64 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.84□□□□□ -2.27
HOXA3O43365 SNORA36.1-201ENST00000363424 132 ntBASIC0.83□□□□□ -2.28
HOXA3O43365 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
HOXA3O43365 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.83□□□□□ -2.28
HOXA3O43365 snoU13.17-201ENST00000458802 104 ntBASIC0.83□□□□□ -2.28
HOXA3O43365 RNA5SP94-201ENST00000516917 108 ntBASIC0.83□□□□□ -2.28
HOXA3O43365 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.83□□□□□ -2.28
HOXA3O43365 MIR6828-201ENST00000636181 60 ntBASIC0.83□□□□□ -2.28
HOXA3O43365 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HOXA3O43365 RNU6-161P-201ENST00000363051 106 ntBASIC0.82□□□□□ -2.28
HOXA3O43365 RNU6-478P-201ENST00000363904 110 ntBASIC0.82□□□□□ -2.28
HOXA3O43365 MIR519E-201ENST00000385075 84 ntBASIC0.82□□□□□ -2.28
HOXA3O43365 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
HOXA3O43365 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms