Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 Y_RNA.264-201ENST00000364665 102 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 RNU6-1051P-201ENST00000365471 102 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 MIR2113-201ENST00000459007 91 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 RNU6-634P-201ENST00000459134 106 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 Y_RNA.697-201ENST00000516776 113 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 RNU6-807P-201ENST00000516805 107 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 MIR4696-201ENST00000581431 70 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 MIR3140-201ENST00000583685 90 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 MIR1297-201ENST00000637311 77 ntBASIC1.14□□□□□ -2.23
TRIM38O00635 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
TRIM38O00635 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRIM38O00635 Y_RNA.42-201ENST00000362660 108 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 Y_RNA.56-201ENST00000362798 112 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 Y_RNA.207-201ENST00000364142 106 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 Y_RNA.386-201ENST00000383913 105 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 RNU6-587P-201ENST00000391282 106 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 MIR1257-201ENST00000408490 117 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 Y_RNA.681-201ENST00000516445 113 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 MIR548H5-201ENST00000580314 60 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
TRIM38O00635 RNU6-664P-201ENST00000362381 107 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 RNU5F-1-201ENST00000362507 117 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 RNA5SP245-201ENST00000364239 121 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 RNU6-154P-201ENST00000384306 106 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 RNU6-540P-201ENST00000384622 101 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 MIR1265-201ENST00000408444 86 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 Y_RNA.596-201ENST00000410462 109 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 SNORD124-201ENST00000459577 104 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 YWHAEP2-201ENST00000580066 112 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 YWHAEP3-201ENST00000582767 121 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 MTRNR2L2-201ENST00000604882 87 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.12□□□□□ -2.23
TRIM38O00635 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM38O00635 Y_RNA.36-201ENST00000362602 112 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 Y_RNA.239-201ENST00000364444 113 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-934P-201ENST00000365154 107 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 SNORD115-31-201ENST00000365318 82 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRIM38O00635 SNORD101-201ENST00000384027 73 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 SNORA24B-201ENST00000384176 131 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-1241P-201ENST00000384536 107 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-291P-201ENST00000384720 107 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 MIR125B2-201ENST00000385128 89 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 AC097635.1-201ENST00000450678 155 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-871P-201ENST00000516122 100 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-1265P-201ENST00000516342 103 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-765P-201ENST00000516916 99 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 MIR4771-2-201ENST00000577758 74 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 MIR4771-1-201ENST00000582617 74 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.11□□□□□ -2.23
TRIM38O00635 RNU6-369P-201ENST00000362515 102 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 Y_RNA.371-201ENST00000365591 113 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 MIR599-201ENST00000385069 95 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 AC067940.1-201ENST00000458411 300 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 RNU7-10P-201ENST00000607194 63 ntBASIC1.1□□□□□ -2.23
TRIM38O00635 RNU6-340P-201ENST00000364005 107 ntBASIC1.09□□□□□ -2.23
TRIM38O00635 Y_RNA.540-201ENST00000384638 111 ntBASIC1.09□□□□□ -2.23
TRIM38O00635 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TRIM38O00635 RNU6-994P-201ENST00000410507 111 ntBASIC1.09□□□□□ -2.23
TRIM38O00635 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TRIM38O00635 RNU6-824P-201ENST00000363724 104 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 Y_RNA.340-201ENST00000365330 92 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 SNORA8.1-201ENST00000384250 140 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 RNU6-1052P-201ENST00000411398 104 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 RNU6-719P-201ENST00000516671 104 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 MIR4676-201ENST00000583078 72 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
TRIM38O00635 RNU6-649P-201ENST00000384463 107 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 RPS26P5-201ENST00000418544 335 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 AC138907.6-201ENST00000568401 126 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 AC138869.1-201ENST00000568623 124 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 AC008608.1-201ENST00000603910 127 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 U6.81-201ENST00000612550 106 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 AL136317.1-201ENST00000612653 226 ntBASIC1.07□□□□□ -2.24
TRIM38O00635 RNU6-535P-201ENST00000384722 107 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 MIR451A-201ENST00000385059 72 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 MIR154-201ENST00000385243 84 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TRIM38O00635 SNORD30.1-201ENST00000391309 70 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 RNU6-935P-201ENST00000410371 100 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 Y_RNA.606-201ENST00000410579 103 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 AC125388.1-201ENST00000459631 156 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 RNA5SP255-201ENST00000516370 107 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 MIR151B-201ENST00000584249 96 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 MIR6515-201ENST00000619843 57 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 U6.111-201ENST00000636093 83 ntBASIC1.06□□□□□ -2.24
TRIM38O00635 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRIM38O00635 Y_RNA.258-201ENST00000364613 105 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 RNY4P3-201ENST00000365254 95 ntBASIC1.05□□□□□ -2.24
TRIM38O00635 RNU6-663P-201ENST00000391105 106 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms