Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 snoU13.19-201ENST00000459148 104 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 RN7SKP19-201ENST00000516016 252 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.4□□□□□ -2.63
SDCBPO00560 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.4□□□□□ -2.63
SDCBPO00560 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.4□□□□□ -2.63
SDCBPO00560 AC107027.2-201ENST00000512197 115 ntBASIC-1.4□□□□□ -2.63
SDCBPO00560 MIR6888-201ENST00000621977 67 ntBASIC-1.4□□□□□ -2.63
SDCBPO00560 MIR3658-201ENST00000636291 56 ntBASIC-1.4□□□□□ -2.63
SDCBPO00560 RNU6-363P-201ENST00000362895 105 ntBASIC-1.41□□□□□ -2.64
SDCBPO00560 RNU6-495P-201ENST00000362995 107 ntBASIC-1.41□□□□□ -2.64
SDCBPO00560 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.41□□□□□ -2.64
SDCBPO00560 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.41□□□□□ -2.64
SDCBPO00560 AC068339.1-201ENST00000526965 141 ntBASIC-1.41□□□□□ -2.64
SDCBPO00560 RNU6-24P-201ENST00000384440 107 ntBASIC-1.42□□□□□ -2.64
SDCBPO00560 RNU6-713P-201ENST00000384761 107 ntBASIC-1.42□□□□□ -2.64
SDCBPO00560 MIR3646-201ENST00000578301 84 ntBASIC-1.42□□□□□ -2.64
SDCBPO00560 MIR4324-201ENST00000584846 72 ntBASIC-1.42□□□□□ -2.64
SDCBPO00560 MIR6738-201ENST00000619620 64 ntBASIC-1.42□□□□□ -2.64
SDCBPO00560 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 RNU6-985P-201ENST00000410182 104 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 AC021146.9-201ENST00000512503 156 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 MIR4306-201ENST00000583390 91 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 MIR3140-201ENST00000583685 90 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 AL353803.5-201ENST00000599815 141 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 AL445584.3-201ENST00000617173 78 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 AC025521.1-201ENST00000621624 286 ntBASIC-1.43□□□□□ -2.64
SDCBPO00560 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 RNU6-918P-201ENST00000391219 106 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 MIR548P-201ENST00000408336 84 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 MIR1302-6-201ENST00000408466 90 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 RNU7-134P-201ENST00000458997 64 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 AL442128.1-201ENST00000615151 90 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 MIR8062-201ENST00000621515 85 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 U6.96-201ENST00000636425 70 ntBASIC-1.44□□□□□ -2.64
SDCBPO00560 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 RNU6-132P-201ENST00000383863 107 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 MIR548D2-201ENST00000384955 97 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 MTND2P23-201ENST00000422990 651 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 MTND5P20-201ENST00000448677 143 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 RNU7-85P-201ENST00000458851 63 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.45□□□□□ -2.64
SDCBPO00560 SNORA24B-201ENST00000384176 131 ntBASIC-1.46□□□□□ -2.64
SDCBPO00560 MIR587-201ENST00000384845 96 ntBASIC-1.46□□□□□ -2.64
SDCBPO00560 RNA5SP476-201ENST00000516613 103 ntBASIC-1.46□□□□□ -2.64
SDCBPO00560 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.46□□□□□ -2.64
SDCBPO00560 AC134503.1-201ENST00000633048 54 ntBASIC-1.46□□□□□ -2.64
SDCBPO00560 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 RNU6-409P-201ENST00000384114 104 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 RNU2-38P-201ENST00000410856 79 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 RNU6-65P-201ENST00000516332 98 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 MIR3121-201ENST00000579680 77 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 MIR4536-1-201ENST00000583537 88 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 MIR3171-201ENST00000584270 74 ntBASIC-1.47□□□□□ -2.64
SDCBPO00560 SNORA63.2-201ENST00000362603 126 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 SNORD50.2-201ENST00000365465 70 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 RNU6-746P-201ENST00000384112 109 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 AL160413.1-201ENST00000622780 310 ntBASIC-1.48□□□□□ -2.65
SDCBPO00560 RNU6-238P-201ENST00000363313 106 ntBASIC-1.49□□□□□ -2.65
SDCBPO00560 RNU6-10P-201ENST00000384036 107 ntBASIC-1.49□□□□□ -2.65
SDCBPO00560 SNORD37.2-201ENST00000391075 66 ntBASIC-1.49□□□□□ -2.65
SDCBPO00560 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.49□□□□□ -2.65
SDCBPO00560 RNU6-479P-201ENST00000516348 105 ntBASIC-1.49□□□□□ -2.65
SDCBPO00560 RNU6-635P-201ENST00000516651 102 ntBASIC-1.49□□□□□ -2.65
SDCBPO00560 AC020661.2-201ENST00000560114 134 ntBASIC-1.49□□□□□ -2.65
SDCBPO00560 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 RNU6-312P-201ENST00000364629 107 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 MT-TD-201ENST00000387419 68 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 MTATP8P1-201ENST00000467115 207 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 RNU7-121P-201ENST00000516604 62 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 AC132825.6-201ENST00000638861 357 ntBASIC-1.5□□□□□ -2.65
SDCBPO00560 SNORD63.1-201ENST00000516178 80 ntBASIC-1.51□□□□□ -2.65
SDCBPO00560 RNA5SP67-201ENST00000516422 131 ntBASIC-1.51□□□□□ -2.65
SDCBPO00560 RNU6-239P-201ENST00000390990 99 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 SNORD58.1-201ENST00000391313 66 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 MIR1263-201ENST00000408324 86 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 SNORD75.2-201ENST00000408784 58 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 RNU7-24P-201ENST00000458867 62 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 U6.104-201ENST00000637979 90 ntBASIC-1.52□□□□□ -2.65
SDCBPO00560 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.53□□□□□ -2.65
SDCBPO00560 MIR548A1-201ENST00000385041 97 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms