Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MIR20A-201ENST00000362279 71 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 RNU6-409P-201ENST00000384114 104 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 SNORA32.3-201ENST00000384772 121 ntBASIC-0.61□□□□□ -2.51
DDX39AO00148 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
DDX39AO00148 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 RNU6-379P-201ENST00000363813 104 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 SNORD95.1-201ENST00000364099 68 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 SNORD116-18-201ENST00000383961 92 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 MIR196A2-201ENST00000385189 110 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
DDX39AO00148 AL158147.1-201ENST00000443970 75 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.62□□□□□ -2.51
DDX39AO00148 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 SNORD101-201ENST00000384027 73 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 MIR652-201ENST00000385278 98 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 RNU6-466P-201ENST00000391224 103 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 RNU6-781P-201ENST00000516377 101 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 RNA5SP66-201ENST00000517178 101 ntBASIC-0.63□□□□□ -2.51
DDX39AO00148 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 SNORD75.1-201ENST00000408373 60 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 RNU6-394P-201ENST00000410735 107 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 RNU6-284P-201ENST00000411105 106 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 AC244090.1-201ENST00000441884 93 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 RNA5SP67-201ENST00000516422 131 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 RNU6-388P-201ENST00000517012 105 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 RNU6-389P-201ENST00000517048 105 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 MIR548X2-201ENST00000579776 100 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 MIR4696-201ENST00000581431 70 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 AC004792.1-201ENST00000614523 137 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 AL442128.1-201ENST00000615151 90 ntBASIC-0.64□□□□□ -2.51
DDX39AO00148 RNU6-664P-201ENST00000362381 107 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 RNY4P6-201ENST00000363667 96 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 RNU6-480P-201ENST00000384332 107 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 MIR9-2-201ENST00000384838 87 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 MIR216B-201ENST00000390186 82 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 snoU13.11-201ENST00000459219 104 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 MIR4432-201ENST00000581823 84 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 U7.2-201ENST00000607576 63 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
DDX39AO00148 RNU6-235P-201ENST00000362644 107 ntBASIC-0.66□□□□□ -2.52
DDX39AO00148 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.66□□□□□ -2.52
DDX39AO00148 RNU4-63P-201ENST00000411313 118 ntBASIC-0.66□□□□□ -2.52
DDX39AO00148 MIR548O2-201ENST00000616090 70 ntBASIC-0.66□□□□□ -2.52
DDX39AO00148 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
DDX39AO00148 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 RNU6-816P-201ENST00000390914 107 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 RNU6-935P-201ENST00000410371 100 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 AP000676.1-201ENST00000533307 52 ntBASIC-0.67□□□□□ -2.52
DDX39AO00148 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.68□□□□□ -2.52
DDX39AO00148 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 RNU6-804P-201ENST00000384286 107 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 RNU6-900P-201ENST00000384498 102 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 MIR569-201ENST00000385228 96 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 MT-TG-201ENST00000387429 68 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 MIR3681-201ENST00000580089 72 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 AC025166.1-201ENST00000612411 163 ntBASIC-0.69□□□□□ -2.52
DDX39AO00148 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.7□□□□□ -2.52
DDX39AO00148 SNORA49-201ENST00000386157 136 ntBASIC-0.7□□□□□ -2.52
DDX39AO00148 MIR3144-201ENST00000579460 79 ntBASIC-0.7□□□□□ -2.52
DDX39AO00148 AC093726.3-201ENST00000637588 150 ntBASIC-0.7□□□□□ -2.52
DDX39AO00148 SNORD58C-201ENST00000365223 64 ntBASIC-0.71□□□□□ -2.52
DDX39AO00148 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.71□□□□□ -2.52
DDX39AO00148 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.71□□□□□ -2.52
DDX39AO00148 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.71□□□□□ -2.52
DDX39AO00148 AC096720.1-201ENST00000604441 183 ntBASIC-0.71□□□□□ -2.52
DDX39AO00148 MTND5P18-201ENST00000445624 1801 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 SNORD115-25-201ENST00000362619 82 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 AL445193.1-201ENST00000441183 141 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 AC145423.2-201ENST00000610631 239 ntBASIC-0.72□□□□□ -2.52
DDX39AO00148 SNORD56B-201ENST00000384713 71 ntBASIC-0.73□□□□□ -2.53
DDX39AO00148 MIR451A-201ENST00000385059 72 ntBASIC-0.73□□□□□ -2.53
DDX39AO00148 RNU6-75P-201ENST00000515944 104 ntBASIC-0.73□□□□□ -2.53
DDX39AO00148 MIR4719-201ENST00000585233 84 ntBASIC-0.73□□□□□ -2.53
DDX39AO00148 AC099654.10-201ENST00000640395 161 ntBASIC-0.73□□□□□ -2.53
DDX39AO00148 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.74□□□□□ -2.53
DDX39AO00148 RNU6-54P-201ENST00000365563 107 ntBASIC-0.74□□□□□ -2.53
DDX39AO00148 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.74□□□□□ -2.53
DDX39AO00148 RNU6-901P-201ENST00000384593 106 ntBASIC-0.74□□□□□ -2.53
DDX39AO00148 RNA5SP272-201ENST00000516095 111 ntBASIC-0.74□□□□□ -2.53
DDX39AO00148 AL391099.1-201ENST00000624635 187 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 263.1 ms