Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR513C-201ENST00000401352 84 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 SNORD18.2-201ENST00000459604 70 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 U7.2-201ENST00000607576 63 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 RNA5SP403-201ENST00000363598 108 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 RNU6-151P-201ENST00000364158 107 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 MIR568-201ENST00000385036 95 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 AC093423.1-201ENST00000440817 142 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 RNU7-164P-201ENST00000459221 62 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 AC021146.9-201ENST00000512503 156 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 SNORD22.1-201ENST00000516331 125 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.25□□□□□ -2.45
COL6A6A6NMZ7 MIR3163-201ENST00000581592 73 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 MIR5704-201ENST00000584029 77 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 AC108081.1-201ENST00000604358 221 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 MIR6851-201ENST00000617060 67 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 RNY4P7-201ENST00000364600 96 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 MIR9-2-201ENST00000384838 87 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 SPINT5P-201ENST00000448174 155 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 AC022559.1-201ENST00000520905 205 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 uc_338.36-201ENST00000622331 158 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 AP001362.1-201ENST00000625165 124 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 MIR1255B1-201ENST00000636325 63 ntBASIC-0.26□□□□□ -2.45
COL6A6A6NMZ7 RNU6-978P-201ENST00000364371 103 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 SNORA51.5-201ENST00000384126 131 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU6-571P-201ENST00000384128 107 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU6-521P-201ENST00000516663 105 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MIR548AG2-201ENST00000581228 64 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MIR6514-201ENST00000622549 70 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNA5SP192-201ENST00000364404 120 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MTATP6P29-201ENST00000415057 132 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU7-55P-201ENST00000459426 62 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU6-287P-201ENST00000516230 98 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 RNU6-175P-201ENST00000516896 107 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 SNORA81.3-201ENST00000517283 198 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 AP000676.1-201ENST00000533307 52 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MIR3144-201ENST00000579460 79 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 YWHAEP2-201ENST00000580066 112 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MIR4280-201ENST00000582178 76 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MIR548AE1-201ENST00000583292 70 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 MIR6507-201ENST00000613630 70 ntBASIC-0.27□□□□□ -2.45
COL6A6A6NMZ7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU6-275P-201ENST00000364910 107 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 MIR582-201ENST00000365731 98 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU6-431P-201ENST00000383874 107 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 AL161932.1-201ENST00000437408 146 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU6-781P-201ENST00000516377 101 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU7-6P-201ENST00000516845 62 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 AL513043.2-201ENST00000573941 143 ntBASIC-0.28□□□□□ -2.45
COL6A6A6NMZ7 RNU4-36P-201ENST00000364294 144 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNU6-312P-201ENST00000364629 107 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNU4-11P-201ENST00000365287 132 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNU6-409P-201ENST00000384114 104 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 SNORD101-201ENST00000384027 73 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNU6-901P-201ENST00000384593 106 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 SNORD83B-201ENST00000386745 93 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 MIR196A1-201ENST00000388006 70 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNA5SP136-201ENST00000410906 107 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 RNA5SP66-201ENST00000517178 101 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 MIR4460-201ENST00000577862 86 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 MIR3179-1-201ENST00000578940 84 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 MIR3179-2-201ENST00000579107 84 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 MIR3179-3-201ENST00000579566 84 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 MIR3179-4-201ENST00000617599 84 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.29□□□□□ -2.46
COL6A6A6NMZ7 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.3□□□□□ -2.46
COL6A6A6NMZ7 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.3□□□□□ -2.46
COL6A6A6NMZ7 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.3□□□□□ -2.46
COL6A6A6NMZ7 RNU6-682P-201ENST00000363843 106 ntBASIC-0.3□□□□□ -2.46
COL6A6A6NMZ7 RNU6-119P-201ENST00000364882 107 ntBASIC-0.3□□□□□ -2.46
COL6A6A6NMZ7 RNU6-905P-201ENST00000384434 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms