Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC007012.1-201ENST00000567192 175 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 MIR4460-201ENST00000577862 86 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 MIR4696-201ENST00000581431 70 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 MIR4743-201ENST00000584576 69 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 AC069503.3-201ENST00000618674 145 ntBASIC-0.17□□□□□ -2.44
TRAV40A0A0B4J280 U8.6-201ENST00000364939 135 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 RNU6V-201ENST00000384105 107 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 SNORA75.1-201ENST00000391130 148 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-175P-201ENST00000516896 107 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 MIR6507-201ENST00000613630 70 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.18□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 SNORD115-44-201ENST00000365391 82 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 RNY1P5-201ENST00000383890 115 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 MT-TY-201ENST00000387409 66 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 MIR892B-201ENST00000401279 77 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 MIR548I1-201ENST00000408810 149 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-75P-201ENST00000515944 104 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 MIR3133-201ENST00000583157 78 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 MIR3914-2-201ENST00000637339 95 ntBASIC-0.19□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-664P-201ENST00000362381 107 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-832P-201ENST00000363319 107 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-302P-201ENST00000365249 107 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 AC244250.2-201ENST00000418731 148 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 RNU7-74P-201ENST00000459104 62 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 AC068339.1-201ENST00000526965 141 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 CR383656.4-201ENST00000546909 122 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 MIR3671-201ENST00000580455 88 ntBASIC-0.2□□□□□ -2.44
TRAV40A0A0B4J280 MIR655-201ENST00000362159 97 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 SNORD114-12-201ENST00000365400 75 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 MIR539-201ENST00000365690 78 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 SNORD101-201ENST00000384027 73 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-209P-201ENST00000384118 107 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-154P-201ENST00000384306 106 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 MIR652-201ENST00000385278 98 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 MIR1912-201ENST00000410389 80 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 SNORA19.1-201ENST00000410656 129 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 RNU7-85P-201ENST00000458851 63 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-659P-201ENST00000516454 104 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 uc_338.10-201ENST00000621872 182 ntBASIC-0.21□□□□□ -2.44
TRAV40A0A0B4J280 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.22□□□□□ -2.44
TRAV40A0A0B4J280 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.22□□□□□ -2.44
TRAV40A0A0B4J280 RNU6-762P-201ENST00000517107 102 ntBASIC-0.22□□□□□ -2.44
TRAV40A0A0B4J280 AL513043.2-201ENST00000573941 143 ntBASIC-0.22□□□□□ -2.44
TRAV40A0A0B4J280 MIR4694-201ENST00000578534 80 ntBASIC-0.22□□□□□ -2.44
TRAV40A0A0B4J280 RNY3P2-201ENST00000362918 102 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNA5SP205-201ENST00000364653 136 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-54P-201ENST00000365563 107 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-132P-201ENST00000383863 107 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-80P-201ENST00000384195 107 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-466P-201ENST00000391224 103 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-795P-201ENST00000516323 103 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-719P-201ENST00000516671 104 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 MIR4679-2-201ENST00000578358 77 ntBASIC-0.23□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 SNORD50.2-201ENST00000365465 70 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 AC097510.1-201ENST00000510945 133 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 MIR5009-201ENST00000578736 100 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 MIR4802-201ENST00000581881 80 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 AC103810.7-201ENST00000607821 91 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 AC012531.4-201ENST00000616509 177 ntBASIC-0.24□□□□□ -2.45
TRAV40A0A0B4J280 SNORD49B-201ENST00000365172 72 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 MIR548A3-201ENST00000385297 97 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 SNORD4A-201ENST00000459174 72 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 MIR4777-201ENST00000583710 86 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 AC096720.1-201ENST00000604441 183 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 MIR548O2-201ENST00000616090 70 ntBASIC-0.25□□□□□ -2.45
TRAV40A0A0B4J280 MIR148A-201ENST00000362215 68 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 MIR582-201ENST00000365731 98 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-480P-201ENST00000384332 107 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 MIR451A-201ENST00000385059 72 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 SNORA49-201ENST00000386157 136 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 SNORD90-201ENST00000391145 111 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 SNORD42B-201ENST00000458893 67 ntBASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
TRAV40A0A0B4J280 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.27□□□□□ -2.45
TRAV40A0A0B4J280 RNU6-811P-201ENST00000384069 107 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms