Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 SNORD42.2-201ENST00000365570 69 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 HLA-S-202ENST00000425174 53 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 RNU7-134P-201ENST00000458997 64 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 MIR6844-201ENST00000637122 62 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 MIR6086-201ENST00000638065 55 ntBASIC-1.58□□□□□ -2.66
TRAV12-1A0A0B4J245 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 MIR29B1-201ENST00000385015 81 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 RNU6-65P-201ENST00000516332 98 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 U6atac.1-201ENST00000616025 117 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.59□□□□□ -2.66
TRAV12-1A0A0B4J245 RNU6-363P-201ENST00000362895 105 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-746P-201ENST00000384112 109 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-576P-201ENST00000390854 102 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU4-61P-201ENST00000411243 107 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 SNORD63.1-201ENST00000516178 80 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-988P-201ENST00000519081 107 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR6818-201ENST00000621576 65 ntBASIC-1.6□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 RNY1P11-201ENST00000363759 113 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 RNA5SP395-201ENST00000516567 118 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR4536-1-201ENST00000583537 88 ntBASIC-1.61□□□□□ -2.67
TRAV12-1A0A0B4J245 SNORA63.2-201ENST00000362603 126 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-924P-201ENST00000362926 108 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 SNORD115-33-201ENST00000363723 82 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 RNY4P28-201ENST00000365281 93 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR759-201ENST00000390224 91 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 SNORA26.4-201ENST00000391188 123 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 AC107027.2-201ENST00000512197 115 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 RNA5SP461-201ENST00000516451 104 ntBASIC-1.62□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR527-201ENST00000385244 85 ntBASIC-1.63□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR548H3-201ENST00000408771 118 ntBASIC-1.63□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR3646-201ENST00000578301 84 ntBASIC-1.63□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR3140-201ENST00000583685 90 ntBASIC-1.63□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR8485-201ENST00000401372 91 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-875P-201ENST00000516488 106 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR4795-201ENST00000584182 89 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 AL442128.1-201ENST00000615151 90 ntBASIC-1.64□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 RNU6-409P-201ENST00000384114 104 ntBASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR548D2-201ENST00000384955 97 ntBASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 MIR4680-201ENST00000580906 66 ntBASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 AC025521.1-201ENST00000621624 286 ntBASIC-1.65□□□□□ -2.67
TRAV12-1A0A0B4J245 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-474P-201ENST00000384243 107 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 MIR548A1-201ENST00000385041 97 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORD75.2-201ENST00000408784 58 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU7-24P-201ENST00000458867 62 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 MIR5591-201ENST00000578248 65 ntBASIC-1.66□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORD50.2-201ENST00000365465 70 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-132P-201ENST00000383863 107 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORA24B-201ENST00000384176 131 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-713P-201ENST00000384761 107 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 MIR1255B2-201ENST00000408618 67 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU7-85P-201ENST00000458851 63 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORD127-201ENST00000458892 86 ntBASIC-1.67□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.68□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU2-51P-201ENST00000410708 197 ntBASIC-1.68□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.68□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 MT-TW-201ENST00000387382 68 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORD37.2-201ENST00000391075 66 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.69□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.7□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.7□□□□□ -2.68
TRAV12-1A0A0B4J245 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.7□□□□□ -2.68
TRAV12-1A0A0B4J245 RNU6-226P-201ENST00000363778 107 ntBASIC-1.7□□□□□ -2.68
TRAV12-1A0A0B4J245 SNORA33.1-201ENST00000364957 130 ntBASIC-1.7□□□□□ -2.68
TRAV12-1A0A0B4J245 MIR548U-201ENST00000390728 81 ntBASIC-1.7□□□□□ -2.68
TRAV12-1A0A0B4J245 U6.104-201ENST00000637979 90 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms