Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-103P-201ENST00000363686 107 ntBASIC-2.28□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.28□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.28□□□□□ -2.77
TRAV1-2A0A0B4J238 Z83846.1-201ENST00000446798 265 ntBASIC-2.28□□□□□ -2.77
TRAV1-2A0A0B4J238 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.29□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.29□□□□□ -2.78
TRAV1-2A0A0B4J238 MTND4P17-201ENST00000470444 350 ntBASIC-2.29□□□□□ -2.78
TRAV1-2A0A0B4J238 RNY4P20-201ENST00000516678 93 ntBASIC-2.29□□□□□ -2.78
TRAV1-2A0A0B4J238 MIR4536-1-201ENST00000583537 88 ntBASIC-2.29□□□□□ -2.78
TRAV1-2A0A0B4J238 AC093424.1-201ENST00000604999 338 ntBASIC-2.29□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 MTATP6P21-201ENST00000440681 189 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 MIR3611-201ENST00000584484 83 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 AL365265.1-201ENST00000621045 234 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 MIR1255B1-201ENST00000636325 63 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 AL512310.12-203ENST00000640543 90 ntBASIC-2.3□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 MT-TM-201ENST00000387377 68 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 SNORD2.1-201ENST00000458762 69 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-65P-201ENST00000516332 98 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 RNA5SP147-201ENST00000516493 109 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 AL132765.2-201ENST00000610812 351 ntBASIC-2.31□□□□□ -2.78
TRAV1-2A0A0B4J238 RNA5SP405-201ENST00000363059 114 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU1-115P-201ENST00000365329 160 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 SNORD116-6-201ENST00000384711 96 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 MIR181A1-201ENST00000385026 110 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-976P-201ENST00000516086 111 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-314P-201ENST00000516574 104 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 U7.5-201ENST00000517224 61 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 MIR4744-201ENST00000581563 82 ntBASIC-2.32□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.559-201ENST00000384686 107 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 SNORA19.1-201ENST00000410656 129 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 SNORA7.5-201ENST00000410672 110 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 SNORD54-201ENST00000459159 67 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 MTND3P3-201ENST00000505004 126 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.33□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-132P-201ENST00000383863 107 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 MT-TI-201ENST00000387365 69 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-695P-201ENST00000391157 104 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-121P-201ENST00000410525 99 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU7-88P-201ENST00000458752 63 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU6-506P-201ENST00000516553 94 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 RNU7-30P-201ENST00000516835 62 ntBASIC-2.34□□□□□ -2.78
TRAV1-2A0A0B4J238 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-382P-201ENST00000365181 106 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-643P-201ENST00000384018 107 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-246P-201ENST00000384702 107 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR521-2-201ENST00000384818 87 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-578P-201ENST00000390980 103 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.35□□□□□ -2.79
TRAV1-2A0A0B4J238 SNORD50.2-201ENST00000365465 70 ntBASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU7-85P-201ENST00000458851 63 ntBASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 AC006254.2-201ENST00000603259 279 ntBASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 AC090574.1-201ENST00000623186 233 ntBASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.36□□□□□ -2.79
TRAV1-2A0A0B4J238 RNA5SP93-201ENST00000362525 114 ntBASIC-2.37□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-518P-201ENST00000516056 96 ntBASIC-2.37□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.37□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR3657-201ENST00000584818 117 ntBASIC-2.37□□□□□ -2.79
TRAV1-2A0A0B4J238 AL137067.1-201ENST00000615933 120 ntBASIC-2.37□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR3163-201ENST00000581592 73 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.38□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-194P-201ENST00000363862 105 ntBASIC-2.39□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR203A-201ENST00000384836 110 ntBASIC-2.39□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-651P-201ENST00000411040 105 ntBASIC-2.39□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR548AG1-201ENST00000579932 66 ntBASIC-2.39□□□□□ -2.79
TRAV1-2A0A0B4J238 MIR6509-201ENST00000614603 85 ntBASIC-2.39□□□□□ -2.79
TRAV1-2A0A0B4J238 AC025521.1-201ENST00000621624 286 ntBASIC-2.39□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-363P-201ENST00000362895 105 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-508P-201ENST00000363231 103 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.4□□□□□ -2.79
TRAV1-2A0A0B4J238 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms