Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 SNORA80D-201ENST00000384488 135 ntBASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 AL450471.1-201ENST00000447509 127 ntBASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 SNORA18.5-201ENST00000516616 101 ntBASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 RNU6-557P-201ENST00000516842 110 ntBASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 RNU7-156P-201ENST00000517214 74 ntBASIC1.57□□□□□ -2.16
PCDHA11Q9Y5I1 MIR96-201ENST00000362288 78 ntBASIC1.56□□□□□ -2.16
PCDHA11Q9Y5I1 RNU6-1260P-201ENST00000362944 107 ntBASIC1.56□□□□□ -2.16
PCDHA11Q9Y5I1 RNU6-910P-201ENST00000390844 107 ntBASIC1.56□□□□□ -2.16
PCDHA11Q9Y5I1 MIR4676-201ENST00000583078 72 ntBASIC1.56□□□□□ -2.16
PCDHA11Q9Y5I1 MIR6515-201ENST00000619843 57 ntBASIC1.56□□□□□ -2.16
PCDHA11Q9Y5I1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.56□□□□□ -2.16
PCDHA11Q9Y5I1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 SNORA63.2-201ENST00000362603 126 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 AC097635.1-201ENST00000450678 155 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 FGF7P7-201ENST00000514120 227 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 RNU6-448P-201ENST00000517052 107 ntBASIC1.55□□□□□ -2.16
PCDHA11Q9Y5I1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 MIRLET7F1-201ENST00000362202 87 ntBASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 RNU1-93P-201ENST00000364704 169 ntBASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 RNU7-90P-201ENST00000459216 62 ntBASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 MIR6779-201ENST00000617283 64 ntBASIC1.54□□□□□ -2.16
PCDHA11Q9Y5I1 RNU6-369P-201ENST00000362515 102 ntBASIC1.53□□□□□ -2.16
PCDHA11Q9Y5I1 Y_RNA.660-201ENST00000516002 120 ntBASIC1.53□□□□□ -2.16
PCDHA11Q9Y5I1 AC138907.6-201ENST00000568401 126 ntBASIC1.53□□□□□ -2.16
PCDHA11Q9Y5I1 AC138869.1-201ENST00000568623 124 ntBASIC1.53□□□□□ -2.16
PCDHA11Q9Y5I1 TRDV1-202ENST00000621643 102 ntBASIC1.53□□□□□ -2.16
PCDHA11Q9Y5I1 MIRLET7A1-201ENST00000362295 80 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-1094P-201ENST00000362416 104 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-686P-201ENST00000364839 107 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-364P-201ENST00000384387 107 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 MIR938-201ENST00000401216 83 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 AL606490.4-201ENST00000423117 127 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 AC145423.2-201ENST00000610631 239 ntBASIC1.52□□□□□ -2.17
PCDHA11Q9Y5I1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-994P-201ENST00000410507 111 ntBASIC1.51□□□□□ -2.17
PCDHA11Q9Y5I1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.51□□□□□ -2.17
PCDHA11Q9Y5I1 AC027335.2-201ENST00000624030 375 ntBASIC1.51□□□□□ -2.17
PCDHA11Q9Y5I1 RNA5SP325-201ENST00000363756 130 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-1229P-201ENST00000364295 107 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-291P-201ENST00000384720 107 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 MIR599-201ENST00000385069 95 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 MIR889-201ENST00000401280 79 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 RNU7-102P-201ENST00000458948 62 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 MIR4804-201ENST00000581683 73 ntBASIC1.5□□□□□ -2.17
PCDHA11Q9Y5I1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-161P-201ENST00000363051 106 ntBASIC1.49□□□□□ -2.17
PCDHA11Q9Y5I1 SNORD26-201ENST00000384147 75 ntBASIC1.49□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-535P-201ENST00000384722 107 ntBASIC1.49□□□□□ -2.17
PCDHA11Q9Y5I1 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
PCDHA11Q9Y5I1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PCDHA11Q9Y5I1 MIR520E-201ENST00000384867 87 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-380P-201ENST00000410207 107 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-1108P-201ENST00000516308 104 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-977P-201ENST00000516411 103 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 U7.4-201ENST00000614961 63 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 U6.100-201ENST00000636230 99 ntBASIC1.48□□□□□ -2.17
PCDHA11Q9Y5I1 RNA5SP245-201ENST00000364239 121 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 SNORD77.2-201ENST00000391045 68 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 RNU7-56P-201ENST00000458744 62 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 RNU6-1265P-201ENST00000516342 103 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 AC008608.1-201ENST00000603910 127 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 MTRNR2L2-201ENST00000604882 87 ntBASIC1.47□□□□□ -2.17
PCDHA11Q9Y5I1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 RNU6-664P-201ENST00000362381 107 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.239-201ENST00000364444 113 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 Y_RNA.264-201ENST00000364665 102 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 SNORD101-201ENST00000384027 73 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 MIR598-201ENST00000384868 97 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 MIR520H-201ENST00000385126 88 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 MIR100-201ENST00000385259 80 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 SNORD90-201ENST00000391145 111 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 RPS29P1-201ENST00000465274 159 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 MIR4696-201ENST00000581431 70 ntBASIC1.46□□□□□ -2.18
PCDHA11Q9Y5I1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 MIR1-1-201ENST00000362147 71 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 RNU1-119P-201ENST00000391122 165 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 AC244505.6-201ENST00000452829 130 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 MIR151B-201ENST00000584249 96 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 MIR6788-201ENST00000618842 66 ntBASIC1.45□□□□□ -2.18
PCDHA11Q9Y5I1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms