Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SCARNA18B-201ENST00000458806 135 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 RN7SL429P-201ENST00000479090 223 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 RN7SL489P-201ENST00000486185 223 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 RN7SL327P-201ENST00000488659 223 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU7-13P-201ENST00000516413 62 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 MIR4484-201ENST00000582855 83 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 RN7SL853P-201ENST00000617250 223 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.69□□□□□ -2.14
PCDHGA11Q9Y5H2 SNORD115-24-201ENST00000363528 82 ntBASIC1.69□□□□□ -2.14
PCDHGA11Q9Y5H2 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
PCDHGA11Q9Y5H2 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
PCDHGA11Q9Y5H2 U3.27-201ENST00000391237 200 ntBASIC1.69□□□□□ -2.14
PCDHGA11Q9Y5H2 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
PCDHGA11Q9Y5H2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PCDHGA11Q9Y5H2 RNA5SP327-201ENST00000362494 101 ntBASIC1.68□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU6-287P-201ENST00000516230 98 ntBASIC1.68□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU6-135P-201ENST00000516769 101 ntBASIC1.68□□□□□ -2.14
PCDHGA11Q9Y5H2 Y_RNA.371-201ENST00000365591 113 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 SNORD89-201ENST00000390981 114 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU2-59P-201ENST00000410482 191 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 U7.7-201ENST00000459276 60 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 AC097510.1-201ENST00000510945 133 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU6-70P-201ENST00000516438 60 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 MIR3134-201ENST00000579433 74 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 MIR3140-201ENST00000583685 90 ntBASIC1.67□□□□□ -2.14
PCDHGA11Q9Y5H2 AC074348.1-201ENST00000426503 132 ntBASIC1.66□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU6-871P-201ENST00000516122 100 ntBASIC1.66□□□□□ -2.14
PCDHGA11Q9Y5H2 Y_RNA.788-201ENST00000622394 112 ntBASIC1.66□□□□□ -2.14
PCDHGA11Q9Y5H2 ZNF209P-201ENST00000593450 2304 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR216B-201ENST00000390186 82 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-1052P-201ENST00000411398 104 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 AC004223.1-201ENST00000479840 271 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 AC002350.1-201ENST00000490759 375 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-469P-201ENST00000516253 101 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-719P-201ENST00000516671 104 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 AC084768.2-201ENST00000622736 221 ntBASIC1.65□□□□□ -2.15
PCDHGA11Q9Y5H2 RNA5SP403-201ENST00000363598 108 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-340P-201ENST00000364005 107 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 Y_RNA.532-201ENST00000384590 113 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 SNORD105-201ENST00000386910 85 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 AC139453.2-201ENST00000487255 133 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 AC104984.5-201ENST00000586878 94 ntBASIC1.64□□□□□ -2.15
PCDHGA11Q9Y5H2 SNORA8.1-201ENST00000384250 140 ntBASIC1.63□□□□□ -2.15
PCDHGA11Q9Y5H2 Y_RNA.606-201ENST00000410579 103 ntBASIC1.63□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR19B1-201ENST00000384829 87 ntBASIC1.62□□□□□ -2.15
PCDHGA11Q9Y5H2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PCDHGA11Q9Y5H2 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
PCDHGA11Q9Y5H2 AC067863.3-201ENST00000624172 122 ntBASIC1.62□□□□□ -2.15
PCDHGA11Q9Y5H2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.61□□□□□ -2.15
PCDHGA11Q9Y5H2 SNORA24B-201ENST00000384176 131 ntBASIC1.61□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR942-201ENST00000401111 86 ntBASIC1.61□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR2113-201ENST00000459007 91 ntBASIC1.61□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU7-104P-201ENST00000459398 79 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU7-161P-201ENST00000517289 62 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 AC025627.3-201ENST00000582078 182 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR6715A-201ENST00000615929 79 ntBASIC1.6□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-1126P-201ENST00000384002 107 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-1177P-201ENST00000391058 104 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR1261-201ENST00000408659 82 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 snoU13.26-201ENST00000459452 105 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 RNU6-523P-201ENST00000516304 54 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR3920-201ENST00000581751 86 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 MIR3124-201ENST00000582636 67 ntBASIC1.59□□□□□ -2.15
PCDHGA11Q9Y5H2 SNORA26.9-201ENST00000391322 122 ntBASIC1.58□□□□□ -2.16
PCDHGA11Q9Y5H2 RNU7-74P-201ENST00000459104 62 ntBASIC1.58□□□□□ -2.16
PCDHGA11Q9Y5H2 MIR4639-201ENST00000584938 69 ntBASIC1.58□□□□□ -2.16
PCDHGA11Q9Y5H2 SNORD26-201ENST00000384147 75 ntBASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 MIR617-201ENST00000385030 97 ntBASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 MIR644A-201ENST00000385262 94 ntBASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 AC114801.3-201ENST00000510231 177 ntBASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 U6.81-201ENST00000612550 106 ntBASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
PCDHGA11Q9Y5H2 SNORA25.8-201ENST00000364831 128 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 RNU6-154P-201ENST00000384306 106 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 RNU6-587P-201ENST00000391282 106 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 RNU6-1015P-201ENST00000517121 99 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
PCDHGA11Q9Y5H2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PCDHGA11Q9Y5H2 RNU6-788P-201ENST00000390967 104 ntBASIC1.55□□□□□ -2.16
PCDHGA11Q9Y5H2 MIR3675-201ENST00000583661 73 ntBASIC1.55□□□□□ -2.16
PCDHGA11Q9Y5H2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.55□□□□□ -2.16
PCDHGA11Q9Y5H2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PCDHGA11Q9Y5H2 RNU6-824P-201ENST00000363724 104 ntBASIC1.54□□□□□ -2.16
PCDHGA11Q9Y5H2 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
PCDHGA11Q9Y5H2 MIR1289-2-201ENST00000408360 111 ntBASIC1.54□□□□□ -2.16
PCDHGA11Q9Y5H2 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms