Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SNORD60.1-201ENST00000362451 73 ntBASIC2.49□□□□□ -2.01
PCDHGA4Q9Y5G9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 MIR519E-201ENST00000385075 84 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 SNORA75.1-201ENST00000391130 148 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 SNORD23.1-201ENST00000408212 104 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 SNORD42B-201ENST00000458893 67 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 snoU13.15-201ENST00000459407 104 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 RNU6-165P-201ENST00000517170 99 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 RNU7-161P-201ENST00000517289 62 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 MIR548V-201ENST00000584165 80 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 MIR6739-201ENST00000622461 75 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 AC080100.1-201ENST00000624239 5356 ntBASIC2.48□□□□□ -2.01
PCDHGA4Q9Y5G9 Y_RNA.174-201ENST00000363781 105 ntBASIC2.47□□□□□ -2.01
PCDHGA4Q9Y5G9 RNU6-1065P-201ENST00000384513 106 ntBASIC2.47□□□□□ -2.01
PCDHGA4Q9Y5G9 AC079140.2-201ENST00000506193 142 ntBASIC2.47□□□□□ -2.01
PCDHGA4Q9Y5G9 SNORA31.14-201ENST00000516728 116 ntBASIC2.47□□□□□ -2.01
PCDHGA4Q9Y5G9 AC019176.1-201ENST00000518519 225 ntBASIC2.47□□□□□ -2.01
PCDHGA4Q9Y5G9 MIR4713-201ENST00000582691 75 ntBASIC2.47□□□□□ -2.01
PCDHGA4Q9Y5G9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 MIR302D-201ENST00000362275 68 ntBASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 Y_RNA.32-201ENST00000362589 110 ntBASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 SNORD33-201ENST00000362761 85 ntBASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 uc_338.16-201ENST00000621804 95 ntBASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA4Q9Y5G9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 RNA5SP289-201ENST00000362332 137 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 SNORD1A-201ENST00000364968 72 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU6V-201ENST00000384105 107 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU1-119P-201ENST00000391122 165 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 SNORA75.2-201ENST00000391138 150 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 SNORA75.3-201ENST00000391231 150 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 snoU13.9-201ENST00000458927 103 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU7-104P-201ENST00000459398 79 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 RNA5SP147-201ENST00000516493 109 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 MIR4804-201ENST00000581683 73 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 MIR4448-201ENST00000584360 86 ntBASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDHGA4Q9Y5G9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU4-88P-201ENST00000411220 86 ntBASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 AC023827.1-201ENST00000569247 97 ntBASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 MIR5092-201ENST00000583139 88 ntBASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 AL359821.1-201ENST00000605519 182 ntBASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA4Q9Y5G9 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU7-56P-201ENST00000458744 62 ntBASIC2.43□□□□□ -2.02
PCDHGA4Q9Y5G9 MIR3937-201ENST00000580135 106 ntBASIC2.43□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU6-1312P-201ENST00000362425 108 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU4-52P-201ENST00000384209 138 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 AC048334.1-201ENST00000477975 159 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 SNORA40.17-201ENST00000517256 115 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 AC067863.3-201ENST00000624172 122 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHGA4Q9Y5G9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PCDHGA4Q9Y5G9 Y_RNA.379-201ENST00000365653 102 ntBASIC2.41□□□□□ -2.02
PCDHGA4Q9Y5G9 HMGN2P23-201ENST00000456759 269 ntBASIC2.41□□□□□ -2.02
PCDHGA4Q9Y5G9 snoU13.23-201ENST00000458863 104 ntBASIC2.41□□□□□ -2.02
PCDHGA4Q9Y5G9 AC025033.1-201ENST00000463883 194 ntBASIC2.41□□□□□ -2.02
PCDHGA4Q9Y5G9 RNU6-990P-201ENST00000364385 104 ntBASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 Y_RNA.250-201ENST00000364542 110 ntBASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 RNU6-994P-201ENST00000410507 111 ntBASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 RNU7-74P-201ENST00000459104 62 ntBASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR4648-201ENST00000580107 72 ntBASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 AL157834.3-201ENST00000615543 103 ntBASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA4Q9Y5G9 ZNF355P-201ENST00000427301 3216 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 RNA5SP456-201ENST00000364002 114 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 RNU6-1162P-201ENST00000384443 104 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR630-201ENST00000384957 97 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 RN7SKP223-201ENST00000410582 62 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 RNU1-123P-201ENST00000458950 160 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 AL512310.8-201ENST00000550183 120 ntBASIC2.39□□□□□ -2.03
PCDHGA4Q9Y5G9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA4Q9Y5G9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA4Q9Y5G9 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR548C-201ENST00000384815 97 ntBASIC2.38□□□□□ -2.03
PCDHGA4Q9Y5G9 AC018659.1-201ENST00000551083 169 ntBASIC2.38□□□□□ -2.03
PCDHGA4Q9Y5G9 RNU6-520P-201ENST00000384717 104 ntBASIC2.37□□□□□ -2.03
PCDHGA4Q9Y5G9 AL591704.2-201ENST00000421658 181 ntBASIC2.37□□□□□ -2.03
PCDHGA4Q9Y5G9 RNU6-902P-201ENST00000517212 91 ntBASIC2.37□□□□□ -2.03
PCDHGA4Q9Y5G9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR100-201ENST00000385259 80 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 SNORD113-2-201ENST00000391082 72 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 AL157398.1-201ENST00000452981 186 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 RNA5SP233-201ENST00000459153 113 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 SNORA31.2-201ENST00000516019 134 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 MIR4287-201ENST00000579398 78 ntBASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA4Q9Y5G9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms