Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 Y_RNA.264-201ENST00000364665 102 ntBASIC1.92□□□□□ -2.1
HCN4Q9Y3Q4 RNU7-21P-201ENST00000459430 62 ntBASIC1.92□□□□□ -2.1
HCN4Q9Y3Q4 RNU6-448P-201ENST00000517052 107 ntBASIC1.92□□□□□ -2.1
HCN4Q9Y3Q4 AL157834.3-201ENST00000615543 103 ntBASIC1.92□□□□□ -2.1
HCN4Q9Y3Q4 RNU6-161P-201ENST00000363051 106 ntBASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 SNORA80D-201ENST00000384488 135 ntBASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 AC138907.6-201ENST00000568401 126 ntBASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 AC138869.1-201ENST00000568623 124 ntBASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 AL645939.4-201ENST00000604495 135 ntBASIC1.91□□□□□ -2.1
HCN4Q9Y3Q4 MIR520H-201ENST00000385126 88 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 AC097635.1-201ENST00000450678 155 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 MIR4255-201ENST00000579351 72 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 MIR4676-201ENST00000583078 72 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 TRDV1-202ENST00000621643 102 ntBASIC1.9□□□□□ -2.11
HCN4Q9Y3Q4 SNORA7.1-201ENST00000363750 139 ntBASIC1.89□□□□□ -2.11
HCN4Q9Y3Q4 Y_RNA.433-201ENST00000384089 102 ntBASIC1.89□□□□□ -2.11
HCN4Q9Y3Q4 SNORD77.2-201ENST00000391045 68 ntBASIC1.89□□□□□ -2.11
HCN4Q9Y3Q4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HCN4Q9Y3Q4 AC139453.2-201ENST00000487255 133 ntBASIC1.89□□□□□ -2.11
HCN4Q9Y3Q4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.89□□□□□ -2.11
HCN4Q9Y3Q4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 Y_RNA.545-201ENST00000384652 105 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 Y_RNA.565-201ENST00000384719 101 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 AC015818.7-201ENST00000428754 109 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 RNU7-40P-201ENST00000516397 64 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HCN4Q9Y3Q4 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
HCN4Q9Y3Q4 MIR938-201ENST00000401216 83 ntBASIC1.87□□□□□ -2.11
HCN4Q9Y3Q4 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
HCN4Q9Y3Q4 RNU7-90P-201ENST00000459216 62 ntBASIC1.87□□□□□ -2.11
HCN4Q9Y3Q4 AC023827.1-201ENST00000569247 97 ntBASIC1.87□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-664P-201ENST00000362381 107 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-364P-201ENST00000384387 107 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-910P-201ENST00000390844 107 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 AL606490.4-201ENST00000423117 127 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 SNORD79.1-201ENST00000516069 84 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 RNU1-92P-201ENST00000517017 135 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 MIR4696-201ENST00000581431 70 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 MIR151B-201ENST00000584249 96 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 AC027335.2-201ENST00000624030 375 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HCN4Q9Y3Q4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-208P-201ENST00000362431 107 ntBASIC1.85□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-369P-201ENST00000362515 102 ntBASIC1.85□□□□□ -2.11
HCN4Q9Y3Q4 MIR1297-201ENST00000637311 77 ntBASIC1.85□□□□□ -2.11
HCN4Q9Y3Q4 MIR599-201ENST00000385069 95 ntBASIC1.84□□□□□ -2.11
HCN4Q9Y3Q4 SNORD90-201ENST00000391145 111 ntBASIC1.84□□□□□ -2.11
HCN4Q9Y3Q4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.84□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-523P-201ENST00000516304 54 ntBASIC1.84□□□□□ -2.11
HCN4Q9Y3Q4 MIR4804-201ENST00000581683 73 ntBASIC1.84□□□□□ -2.11
HCN4Q9Y3Q4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 SNORD101-201ENST00000384027 73 ntBASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-291P-201ENST00000384720 107 ntBASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-535P-201ENST00000384722 107 ntBASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 RNU7-56P-201ENST00000458744 62 ntBASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-807P-201ENST00000516805 107 ntBASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
HCN4Q9Y3Q4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 RNA5SP245-201ENST00000364239 121 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 RNY4P3-201ENST00000365254 95 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 SCARNA18B-201ENST00000458806 135 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 RNU7-102P-201ENST00000458948 62 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 RN7SL793P-201ENST00000583259 296 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 AC008608.1-201ENST00000603910 127 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 U6.100-201ENST00000636230 99 ntBASIC1.82□□□□□ -2.12
HCN4Q9Y3Q4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 AC244505.6-201ENST00000452829 130 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 RPS29P1-201ENST00000465274 159 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-303P-201ENST00000517091 106 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 YWHAEP2-201ENST00000580066 112 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 YWHAEP3-201ENST00000582767 121 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 MIR6078-201ENST00000611069 100 ntBASIC1.81□□□□□ -2.12
HCN4Q9Y3Q4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 Y_RNA.532-201ENST00000384590 113 ntBASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 SNORD12-201ENST00000391002 90 ntBASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 AC074348.1-201ENST00000426503 132 ntBASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 snoU13.17-201ENST00000458802 104 ntBASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-977P-201ENST00000516411 103 ntBASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 SNORA70.22-201ENST00000517160 124 ntBASIC1.8□□□□□ -2.12
HCN4Q9Y3Q4 MIR1-1-201ENST00000362147 71 ntBASIC1.79□□□□□ -2.12
HCN4Q9Y3Q4 RNU6-994P-201ENST00000410507 111 ntBASIC1.79□□□□□ -2.12
HCN4Q9Y3Q4 MIR4421-201ENST00000578133 69 ntBASIC1.79□□□□□ -2.12
HCN4Q9Y3Q4 MIR3134-201ENST00000579433 74 ntBASIC1.79□□□□□ -2.12
HCN4Q9Y3Q4 MIR6788-201ENST00000618842 66 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms