Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 SNORD41-201ENST00000386967 70 ntBASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 MIR18B-201ENST00000454574 71 ntBASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 MIR548V-201ENST00000584165 80 ntBASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 MIR6516-201ENST00000630554 81 ntBASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDZRN3Q9UPQ7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 RNU6-203P-201ENST00000384038 104 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 snoU13.25-201ENST00000458945 104 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 RN7SL274P-201ENST00000492268 272 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 AC138907.6-201ENST00000568401 126 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 AC138869.1-201ENST00000568623 124 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 MIR4287-201ENST00000579398 78 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 SNRPGP19-201ENST00000603826 189 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.56□□□□□ -2
PDZRN3Q9UPQ7 MIR377-201ENST00000362145 69 ntBASIC2.55□□□□□ -2
PDZRN3Q9UPQ7 Y_RNA.226-201ENST00000364337 114 ntBASIC2.55□□□□□ -2
PDZRN3Q9UPQ7 RNA5SP501-201ENST00000410990 112 ntBASIC2.55□□□□□ -2
PDZRN3Q9UPQ7 RNU1-40P-201ENST00000516816 164 ntBASIC2.55□□□□□ -2
PDZRN3Q9UPQ7 RNU1-97P-201ENST00000516872 164 ntBASIC2.55□□□□□ -2
PDZRN3Q9UPQ7 MIR630-201ENST00000384957 97 ntBASIC2.54□□□□□ -2
PDZRN3Q9UPQ7 RNA5SP465-201ENST00000391195 109 ntBASIC2.54□□□□□ -2
PDZRN3Q9UPQ7 AC079804.2-201ENST00000490376 200 ntBASIC2.54□□□□□ -2
PDZRN3Q9UPQ7 RNA5SP147-201ENST00000516493 109 ntBASIC2.54□□□□□ -2
PDZRN3Q9UPQ7 SNORA40.17-201ENST00000517256 115 ntBASIC2.54□□□□□ -2
PDZRN3Q9UPQ7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 RNU6-580P-201ENST00000365159 107 ntBASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 RNU6-260P-201ENST00000384092 107 ntBASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 MIR7-2-201ENST00000384970 110 ntBASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 AL356379.1-201ENST00000414105 126 ntBASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 snoU13.31-201ENST00000607291 104 ntBASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.53□□□□□ -2
PDZRN3Q9UPQ7 RNA5SP245-201ENST00000364239 121 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 RNU4-33P-201ENST00000364316 85 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 MIR194-1-201ENST00000384892 85 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 RNA5SP95-201ENST00000410319 137 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 AC108667.1-201ENST00000428618 249 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 RNU7-185P-201ENST00000459215 60 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 RNU6-765P-201ENST00000516916 99 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.52□□□□□ -2.01
PDZRN3Q9UPQ7 MIR518A2-201ENST00000384966 87 ntBASIC2.51□□□□□ -2.01
PDZRN3Q9UPQ7 AP003716.2-201ENST00000528260 108 ntBASIC2.51□□□□□ -2.01
PDZRN3Q9UPQ7 AC004965.1-201ENST00000413033 213 ntBASIC2.5□□□□□ -2.01
PDZRN3Q9UPQ7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.5□□□□□ -2.01
PDZRN3Q9UPQ7 MIR6739-201ENST00000622461 75 ntBASIC2.5□□□□□ -2.01
PDZRN3Q9UPQ7 SNORD115-44-201ENST00000365391 82 ntBASIC2.49□□□□□ -2.01
PDZRN3Q9UPQ7 MIR1185-1-201ENST00000408598 86 ntBASIC2.49□□□□□ -2.01
PDZRN3Q9UPQ7 MIR548AG2-201ENST00000581228 64 ntBASIC2.49□□□□□ -2.01
PDZRN3Q9UPQ7 SNORA2.1-201ENST00000363089 137 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 MIR545-201ENST00000385085 106 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 RNU6-360P-201ENST00000390944 104 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 RNU6-922P-201ENST00000516753 99 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 AC019176.1-201ENST00000518519 225 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 MIR4781-201ENST00000585250 76 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.48□□□□□ -2.01
PDZRN3Q9UPQ7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 RNU6-54P-201ENST00000365563 107 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 MIR1287-201ENST00000408492 90 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 RNA5SP100-201ENST00000410903 110 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 RNA5SP59-201ENST00000410922 110 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.47□□□□□ -2.01
PDZRN3Q9UPQ7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
PDZRN3Q9UPQ7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.46□□□□□ -2.02
PDZRN3Q9UPQ7 MIR1257-201ENST00000408490 117 ntBASIC2.46□□□□□ -2.02
PDZRN3Q9UPQ7 SNORD42B-201ENST00000458893 67 ntBASIC2.46□□□□□ -2.02
PDZRN3Q9UPQ7 snoU13.21-201ENST00000459368 105 ntBASIC2.46□□□□□ -2.02
PDZRN3Q9UPQ7 MIR548O2-201ENST00000616090 70 ntBASIC2.46□□□□□ -2.02
PDZRN3Q9UPQ7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PDZRN3Q9UPQ7 MIR378A-201ENST00000362177 66 ntBASIC2.45□□□□□ -2.02
PDZRN3Q9UPQ7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.45□□□□□ -2.02
PDZRN3Q9UPQ7 AC244505.6-201ENST00000452829 130 ntBASIC2.45□□□□□ -2.02
PDZRN3Q9UPQ7 SNORA31.17-201ENST00000516953 127 ntBASIC2.45□□□□□ -2.02
PDZRN3Q9UPQ7 AL359851.1-201ENST00000569460 4997 ntBASIC2.44□□□□□ -2.02
PDZRN3Q9UPQ7 RNU6-1126P-201ENST00000384002 107 ntBASIC2.44□□□□□ -2.02
PDZRN3Q9UPQ7 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
PDZRN3Q9UPQ7 AL157398.1-201ENST00000452981 186 ntBASIC2.44□□□□□ -2.02
PDZRN3Q9UPQ7 AL096840.1-201ENST00000603287 93 ntBASIC2.44□□□□□ -2.02
PDZRN3Q9UPQ7 U1.36-201ENST00000620684 176 ntBASIC2.44□□□□□ -2.02
PDZRN3Q9UPQ7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PDZRN3Q9UPQ7 RNU6-990P-201ENST00000364385 104 ntBASIC2.43□□□□□ -2.02
PDZRN3Q9UPQ7 MIR216B-201ENST00000390186 82 ntBASIC2.43□□□□□ -2.02
PDZRN3Q9UPQ7 AL161935.2-201ENST00000414627 60 ntBASIC2.43□□□□□ -2.02
PDZRN3Q9UPQ7 MIR4255-201ENST00000579351 72 ntBASIC2.43□□□□□ -2.02
PDZRN3Q9UPQ7 U4.4-201ENST00000620626 117 ntBASIC2.43□□□□□ -2.02
PDZRN3Q9UPQ7 RNA5SP259-201ENST00000365541 109 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 SNORA67.5-201ENST00000391036 107 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 SNORD113-2-201ENST00000391082 72 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 SNORA17.3-201ENST00000391159 129 ntBASIC2.42□□□□□ -2.02
PDZRN3Q9UPQ7 RNA5SP450-201ENST00000411206 102 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms