Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC244505.6-201ENST00000452829 130 ntBASIC1.13□□□□□ -2.23
DDX41Q9UJV9 RNU7-106P-201ENST00000459514 67 ntBASIC1.13□□□□□ -2.23
DDX41Q9UJV9 RNA5SP436-201ENST00000516020 115 ntBASIC1.13□□□□□ -2.23
DDX41Q9UJV9 RNU6-1260P-201ENST00000362944 107 ntBASIC1.12□□□□□ -2.23
DDX41Q9UJV9 SNORD58A-201ENST00000383875 65 ntBASIC1.12□□□□□ -2.23
DDX41Q9UJV9 RNA5SP222-201ENST00000411039 105 ntBASIC1.12□□□□□ -2.23
DDX41Q9UJV9 AC025521.1-201ENST00000621624 286 ntBASIC1.12□□□□□ -2.23
DDX41Q9UJV9 SNORD36A-201ENST00000362874 73 ntBASIC1.11□□□□□ -2.23
DDX41Q9UJV9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.11□□□□□ -2.23
DDX41Q9UJV9 RNU6-905P-201ENST00000384434 107 ntBASIC1.11□□□□□ -2.23
DDX41Q9UJV9 ACA64.5-201ENST00000516207 127 ntBASIC1.11□□□□□ -2.23
DDX41Q9UJV9 AL513043.2-201ENST00000573941 143 ntBASIC1.11□□□□□ -2.23
DDX41Q9UJV9 U7.3-201ENST00000616123 62 ntBASIC1.11□□□□□ -2.23
DDX41Q9UJV9 MIR18A-201ENST00000362310 71 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 Y_RNA.220-201ENST00000364244 109 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 MIR644A-201ENST00000385262 94 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 MIR3678-201ENST00000578455 94 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 MIR3973-201ENST00000579824 107 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
DDX41Q9UJV9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.1□□□□□ -2.23
DDX41Q9UJV9 SNORD115-24-201ENST00000363528 82 ntBASIC1.09□□□□□ -2.23
DDX41Q9UJV9 RNU6-640P-201ENST00000363693 105 ntBASIC1.09□□□□□ -2.23
DDX41Q9UJV9 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
DDX41Q9UJV9 RNU6-466P-201ENST00000391224 103 ntBASIC1.09□□□□□ -2.23
DDX41Q9UJV9 RNU6-162P-201ENST00000516228 103 ntBASIC1.09□□□□□ -2.23
DDX41Q9UJV9 MALAT1.1-201ENST00000618249 95 ntBASIC1.09□□□□□ -2.23
DDX41Q9UJV9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
DDX41Q9UJV9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
DDX41Q9UJV9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.08□□□□□ -2.24
DDX41Q9UJV9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.08□□□□□ -2.24
DDX41Q9UJV9 MIR4639-201ENST00000584938 69 ntBASIC1.08□□□□□ -2.24
DDX41Q9UJV9 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.08□□□□□ -2.24
DDX41Q9UJV9 RNA5SP325-201ENST00000363756 130 ntBASIC1.07□□□□□ -2.24
DDX41Q9UJV9 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
DDX41Q9UJV9 RNY4P30-201ENST00000410216 95 ntBASIC1.07□□□□□ -2.24
DDX41Q9UJV9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.07□□□□□ -2.24
DDX41Q9UJV9 Y_RNA.648-201ENST00000459455 110 ntBASIC1.07□□□□□ -2.24
DDX41Q9UJV9 MIR5000-201ENST00000577717 103 ntBASIC1.07□□□□□ -2.24
DDX41Q9UJV9 Y_RNA.221-201ENST00000364248 96 ntBASIC1.06□□□□□ -2.24
DDX41Q9UJV9 SNORA36.2-201ENST00000384004 127 ntBASIC1.06□□□□□ -2.24
DDX41Q9UJV9 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
DDX41Q9UJV9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.06□□□□□ -2.24
DDX41Q9UJV9 Y_RNA.290-201ENST00000364879 114 ntBASIC1.05□□□□□ -2.24
DDX41Q9UJV9 PSMC1P5-201ENST00000512850 177 ntBASIC1.04□□□□□ -2.24
DDX41Q9UJV9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.04□□□□□ -2.24
DDX41Q9UJV9 SNORD18A-201ENST00000363753 72 ntBASIC1.03□□□□□ -2.24
DDX41Q9UJV9 SNORD28-201ENST00000384706 75 ntBASIC1.03□□□□□ -2.24
DDX41Q9UJV9 RNU6-519P-201ENST00000410590 108 ntBASIC1.03□□□□□ -2.24
DDX41Q9UJV9 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
DDX41Q9UJV9 RNU6-65P-201ENST00000516332 98 ntBASIC1.03□□□□□ -2.24
DDX41Q9UJV9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.02□□□□□ -2.25
DDX41Q9UJV9 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
DDX41Q9UJV9 MIR4536-1-201ENST00000583537 88 ntBASIC1.02□□□□□ -2.25
DDX41Q9UJV9 snoU13.11-201ENST00000459219 104 ntBASIC1.01□□□□□ -2.25
DDX41Q9UJV9 MIR4698-201ENST00000577795 80 ntBASIC1.01□□□□□ -2.25
DDX41Q9UJV9 AC244669.1-204ENST00000621564 178 ntBASIC1.01□□□□□ -2.25
DDX41Q9UJV9 AC067863.3-201ENST00000624172 122 ntBASIC1.01□□□□□ -2.25
DDX41Q9UJV9 RNU7-104P-201ENST00000459398 79 ntBASIC1□□□□□ -2.25
DDX41Q9UJV9 RNA5SP170-201ENST00000517150 101 ntBASIC1□□□□□ -2.25
DDX41Q9UJV9 TRDV1-202ENST00000621643 102 ntBASIC1□□□□□ -2.25
DDX41Q9UJV9 Y_RNA.190-201ENST00000363964 101 ntBASIC0.99□□□□□ -2.25
DDX41Q9UJV9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.99□□□□□ -2.25
DDX41Q9UJV9 MIR140-201ENST00000385282 100 ntBASIC0.99□□□□□ -2.25
DDX41Q9UJV9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
DDX41Q9UJV9 MIR548L-201ENST00000408303 86 ntBASIC0.99□□□□□ -2.25
DDX41Q9UJV9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.99□□□□□ -2.25
DDX41Q9UJV9 RNU6-957P-201ENST00000363652 99 ntBASIC0.98□□□□□ -2.25
DDX41Q9UJV9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.98□□□□□ -2.25
DDX41Q9UJV9 RNU6-1131P-201ENST00000364955 107 ntBASIC0.98□□□□□ -2.25
DDX41Q9UJV9 MIR488-201ENST00000365739 83 ntBASIC0.98□□□□□ -2.25
DDX41Q9UJV9 RNU7-13P-201ENST00000516413 62 ntBASIC0.98□□□□□ -2.25
DDX41Q9UJV9 RNA5SP403-201ENST00000363598 108 ntBASIC0.97□□□□□ -2.25
DDX41Q9UJV9 SNORD115-44-201ENST00000365391 82 ntBASIC0.97□□□□□ -2.25
DDX41Q9UJV9 MIR146A-201ENST00000385201 99 ntBASIC0.97□□□□□ -2.25
DDX41Q9UJV9 Y_RNA.609-201ENST00000410669 89 ntBASIC0.97□□□□□ -2.25
DDX41Q9UJV9 RNA5SP94-201ENST00000516917 108 ntBASIC0.97□□□□□ -2.25
DDX41Q9UJV9 RNA5SP47-201ENST00000517230 109 ntBASIC0.97□□□□□ -2.25
DDX41Q9UJV9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
DDX41Q9UJV9 AL161932.1-201ENST00000437408 146 ntBASIC0.96□□□□□ -2.26
DDX41Q9UJV9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.96□□□□□ -2.26
DDX41Q9UJV9 RNU7-161P-201ENST00000517289 62 ntBASIC0.96□□□□□ -2.26
DDX41Q9UJV9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.96□□□□□ -2.26
DDX41Q9UJV9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.95□□□□□ -2.26
DDX41Q9UJV9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.95□□□□□ -2.26
DDX41Q9UJV9 RN7SL793P-201ENST00000583259 296 ntBASIC0.95□□□□□ -2.26
DDX41Q9UJV9 SNORD116-22-201ENST00000384430 92 ntBASIC0.94□□□□□ -2.26
DDX41Q9UJV9 Y_RNA.596-201ENST00000410462 109 ntBASIC0.94□□□□□ -2.26
DDX41Q9UJV9 SNORD4B-201ENST00000459083 72 ntBASIC0.94□□□□□ -2.26
DDX41Q9UJV9 RNA5SP227-201ENST00000516184 113 ntBASIC0.94□□□□□ -2.26
DDX41Q9UJV9 MIR4653-201ENST00000585107 83 ntBASIC0.94□□□□□ -2.26
DDX41Q9UJV9 AC092634.7-201ENST00000621022 103 ntBASIC0.94□□□□□ -2.26
DDX41Q9UJV9 Y_RNA.369-201ENST00000365568 117 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 RNY1P4-201ENST00000384595 115 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 RNY1P7-201ENST00000384743 110 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 RNU6-844P-201ENST00000517175 102 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 MIR5582-201ENST00000579697 68 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 AL590095.2-201ENST00000604136 117 ntBASIC0.93□□□□□ -2.26
DDX41Q9UJV9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms