Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 RNU6-957P-201ENST00000363652 99 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 RNU6-524P-201ENST00000384270 107 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 RNU6-364P-201ENST00000384387 107 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 MIR100-201ENST00000385259 80 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 RNU6-977P-201ENST00000516411 103 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
LRIT1Q9P2V4 RNU6-1276P-201ENST00000365372 104 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 MIR520F-201ENST00000384824 87 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 MIR635-201ENST00000384830 98 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 RNU7-153P-201ENST00000516455 62 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.11□□□□□ -2.23
LRIT1Q9P2V4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRIT1Q9P2V4 MIR1-1-201ENST00000362147 71 ntBASIC1.1□□□□□ -2.23
LRIT1Q9P2V4 RNU6-228P-201ENST00000362700 106 ntBASIC1.1□□□□□ -2.23
LRIT1Q9P2V4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.1□□□□□ -2.23
LRIT1Q9P2V4 MIR19B1-201ENST00000384829 87 ntBASIC1.1□□□□□ -2.23
LRIT1Q9P2V4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.1□□□□□ -2.23
LRIT1Q9P2V4 RNU4-32P-201ENST00000363404 141 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RNU6-132P-201ENST00000383863 107 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RNU6-535P-201ENST00000384722 107 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 MIR519A1-201ENST00000385257 85 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RNU6-243P-201ENST00000391140 107 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RNU7-171P-201ENST00000459581 62 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 MIR548H5-201ENST00000580314 60 ntBASIC1.09□□□□□ -2.23
LRIT1Q9P2V4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 RNA5SP292-201ENST00000390974 118 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
LRIT1Q9P2V4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 RNU1-119P-201ENST00000391122 165 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 RNA5SP225-201ENST00000410874 135 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 SNORA31.14-201ENST00000516728 116 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 uc_338.16-201ENST00000621804 95 ntBASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LRIT1Q9P2V4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.219-201ENST00000364232 113 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 MIR519C-201ENST00000385053 87 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 MIR520H-201ENST00000385126 88 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 SNORD78.1-201ENST00000390866 65 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 MIR6788-201ENST00000618842 66 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 U6.100-201ENST00000636230 99 ntBASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.06□□□□□ -2.24
LRIT1Q9P2V4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 RNU6-242P-201ENST00000384359 107 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 MIR599-201ENST00000385069 95 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 MIR1255A-201ENST00000408338 113 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 AC097635.1-201ENST00000450678 155 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 MIR4666B-201ENST00000578142 81 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 MIR4536-1-201ENST00000583537 88 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 TRDV1-202ENST00000621643 102 ntBASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
LRIT1Q9P2V4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
LRIT1Q9P2V4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LRIT1Q9P2V4 SNORD90-201ENST00000391145 111 ntBASIC1.04□□□□□ -2.24
LRIT1Q9P2V4 RNA5SP395-201ENST00000516567 118 ntBASIC1.04□□□□□ -2.24
LRIT1Q9P2V4 MIR3064-201ENST00000581130 66 ntBASIC1.04□□□□□ -2.24
LRIT1Q9P2V4 RNU7-10P-201ENST00000607194 63 ntBASIC1.04□□□□□ -2.24
LRIT1Q9P2V4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.437-201ENST00000384113 113 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 MIR200A-201ENST00000384875 90 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 RNU6-466P-201ENST00000391224 103 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 AC244505.6-201ENST00000452829 130 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 AC067940.1-201ENST00000458411 300 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 RNU6-65P-201ENST00000516332 98 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 AC140658.3-201ENST00000567603 271 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 AC138907.6-201ENST00000568401 126 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 AC138869.1-201ENST00000568623 124 ntBASIC1.03□□□□□ -2.24
LRIT1Q9P2V4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 AC093729.1-201ENST00000513074 128 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 AC104996.3-201ENST00000590718 94 ntBASIC1.02□□□□□ -2.25
LRIT1Q9P2V4 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms