Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 SNORA49-201ENST00000386157 136 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 RNU6-239P-201ENST00000390990 99 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 SNORD57-201ENST00000448188 72 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 MIR2113-201ENST00000459007 91 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 RNU6-75P-201ENST00000515944 104 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 AL117187.1-201ENST00000555482 181 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 MIR4536-1-201ENST00000583537 88 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 MIR8068-201ENST00000618032 68 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 AP001362.1-201ENST00000625165 124 ntBASIC-0.35□□□□□ -2.46
CCDC88CQ9P219 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 SNORA25.7-201ENST00000364375 127 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 SNORA51.5-201ENST00000384126 131 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 RNU6-574P-201ENST00000384265 107 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 RNU6-905P-201ENST00000384434 107 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 SNORD38.2-201ENST00000384470 69 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 MIR216B-201ENST00000390186 82 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 AL161932.1-201ENST00000437408 146 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 RNU7-121P-201ENST00000516604 62 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 RNU6-861P-201ENST00000516745 106 ntBASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.35□□□□□ -2.47
CCDC88CQ9P219 RNU6-275P-201ENST00000364910 107 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 RNU6-154P-201ENST00000384306 106 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 MIR9-2-201ENST00000384838 87 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 SNORD77B-201ENST00000391112 67 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 RNU6-460P-201ENST00000391158 108 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 RNA5SP451-201ENST00000410588 110 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 MTCYBP9-201ENST00000431021 303 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 AC074198.2-201ENST00000508153 258 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.36□□□□□ -2.47
CCDC88CQ9P219 SNORD114-14-201ENST00000362723 75 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 RNU6-832P-201ENST00000363319 107 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 SNORA81.3-201ENST00000517283 198 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 MIR6854-201ENST00000614935 69 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 RNU6-151P-201ENST00000364158 107 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 MIR652-201ENST00000385278 98 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 MIR759-201ENST00000390224 91 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 SNORA75.5-201ENST00000391291 81 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 SNORA25.13-201ENST00000516395 103 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 MIR3613-201ENST00000579844 87 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 MIR4696-201ENST00000581431 70 ntBASIC-0.37□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 RNY1P11-201ENST00000363759 113 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 SNORD114-4-201ENST00000363962 75 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 RNU6-616P-201ENST00000384353 107 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 RNU6-901P-201ENST00000384593 106 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 MIR34C-201ENST00000384831 77 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 MIR1468-201ENST00000410600 86 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 SNORD18.2-201ENST00000459604 70 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 MTATP8P1-201ENST00000467115 207 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 SNORD75.1-201ENST00000408373 60 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 AC097510.1-201ENST00000510945 133 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 RNU7-6P-201ENST00000516845 62 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 AC130289.1-201ENST00000577321 73 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 U6.104-201ENST00000637979 90 ntBASIC-0.38□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 MIRLET7B-201ENST00000385140 83 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 MIR513C-201ENST00000401352 84 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 RNU6-111P-201ENST00000517179 105 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.39□□□□□ -2.47
CCDC88CQ9P219 RNU6-502P-201ENST00000362419 108 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 SNORD22.1-201ENST00000516331 125 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 RNA5SP67-201ENST00000516422 131 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms