Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
CXXC1Q9P0U4 SNORD78.1-201ENST00000390866 65 ntBASIC1.68□□□□□ -2.14
CXXC1Q9P0U4 FABP5P4-201ENST00000437203 171 ntBASIC1.68□□□□□ -2.14
CXXC1Q9P0U4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.68□□□□□ -2.14
CXXC1Q9P0U4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.67□□□□□ -2.14
CXXC1Q9P0U4 RNU1-93P-201ENST00000364704 169 ntBASIC1.67□□□□□ -2.14
CXXC1Q9P0U4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.67□□□□□ -2.14
CXXC1Q9P0U4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.67□□□□□ -2.14
CXXC1Q9P0U4 MIR6078-201ENST00000611069 100 ntBASIC1.67□□□□□ -2.14
CXXC1Q9P0U4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
CXXC1Q9P0U4 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
CXXC1Q9P0U4 AC093729.1-201ENST00000513074 128 ntBASIC1.66□□□□□ -2.14
CXXC1Q9P0U4 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
CXXC1Q9P0U4 AC008608.1-201ENST00000603910 127 ntBASIC1.66□□□□□ -2.14
CXXC1Q9P0U4 RNU6-811P-201ENST00000384069 107 ntBASIC1.65□□□□□ -2.15
CXXC1Q9P0U4 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
CXXC1Q9P0U4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.65□□□□□ -2.15
CXXC1Q9P0U4 MIR599-201ENST00000385069 95 ntBASIC1.65□□□□□ -2.15
CXXC1Q9P0U4 MIR548U-201ENST00000390728 81 ntBASIC1.65□□□□□ -2.15
CXXC1Q9P0U4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.65□□□□□ -2.15
CXXC1Q9P0U4 RNU6-957P-201ENST00000363652 99 ntBASIC1.64□□□□□ -2.15
CXXC1Q9P0U4 Y_RNA.437-201ENST00000384113 113 ntBASIC1.64□□□□□ -2.15
CXXC1Q9P0U4 RNU6-524P-201ENST00000384270 107 ntBASIC1.64□□□□□ -2.15
CXXC1Q9P0U4 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
CXXC1Q9P0U4 Y_RNA.685-201ENST00000516532 108 ntBASIC1.64□□□□□ -2.15
CXXC1Q9P0U4 AC019288.1-201ENST00000557918 224 ntBASIC1.64□□□□□ -2.15
CXXC1Q9P0U4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 SNORA25.8-201ENST00000364831 128 ntBASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 MIR19B1-201ENST00000384829 87 ntBASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 MIR520E-201ENST00000384867 87 ntBASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 SNORD89-201ENST00000390981 114 ntBASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CXXC1Q9P0U4 MIR520H-201ENST00000385126 88 ntBASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 MIR4666B-201ENST00000578142 81 ntBASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 MIR151B-201ENST00000584249 96 ntBASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 TRDV1-202ENST00000621643 102 ntBASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
CXXC1Q9P0U4 Y_RNA.178-201ENST00000363832 102 ntBASIC1.61□□□□□ -2.15
CXXC1Q9P0U4 MIR942-201ENST00000401111 86 ntBASIC1.61□□□□□ -2.15
CXXC1Q9P0U4 U7.7-201ENST00000459276 60 ntBASIC1.61□□□□□ -2.15
CXXC1Q9P0U4 RPS29P1-201ENST00000465274 159 ntBASIC1.61□□□□□ -2.15
CXXC1Q9P0U4 MIR6788-201ENST00000618842 66 ntBASIC1.61□□□□□ -2.15
CXXC1Q9P0U4 RNU6-228P-201ENST00000362700 106 ntBASIC1.6□□□□□ -2.15
CXXC1Q9P0U4 RNU6-75P-201ENST00000515944 104 ntBASIC1.6□□□□□ -2.15
CXXC1Q9P0U4 RNA5SP245-201ENST00000364239 121 ntBASIC1.59□□□□□ -2.15
CXXC1Q9P0U4 RNU6-1275P-201ENST00000391087 107 ntBASIC1.59□□□□□ -2.15
CXXC1Q9P0U4 AC104996.3-201ENST00000590718 94 ntBASIC1.59□□□□□ -2.15
CXXC1Q9P0U4 SNORD105-201ENST00000386910 85 ntBASIC1.58□□□□□ -2.16
CXXC1Q9P0U4 AC244505.6-201ENST00000452829 130 ntBASIC1.58□□□□□ -2.16
CXXC1Q9P0U4 RNU7-153P-201ENST00000516455 62 ntBASIC1.58□□□□□ -2.16
CXXC1Q9P0U4 MIR4796-201ENST00000580742 81 ntBASIC1.58□□□□□ -2.16
CXXC1Q9P0U4 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
CXXC1Q9P0U4 RNA5SP117-201ENST00000365294 118 ntBASIC1.57□□□□□ -2.16
CXXC1Q9P0U4 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
CXXC1Q9P0U4 MIR548J-201ENST00000408833 112 ntBASIC1.57□□□□□ -2.16
CXXC1Q9P0U4 MIR3064-201ENST00000581130 66 ntBASIC1.57□□□□□ -2.16
CXXC1Q9P0U4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.57□□□□□ -2.16
CXXC1Q9P0U4 MIR26B-201ENST00000362251 77 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 MIR1255A-201ENST00000408338 113 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 SNORA25.13-201ENST00000516395 103 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 SNORA31.14-201ENST00000516728 116 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 AC140658.3-201ENST00000567603 271 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 uc_338.16-201ENST00000621804 95 ntBASIC1.56□□□□□ -2.16
CXXC1Q9P0U4 MIRLET7F1-201ENST00000362202 87 ntBASIC1.55□□□□□ -2.16
CXXC1Q9P0U4 RNU6-652P-201ENST00000365488 107 ntBASIC1.55□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.491-201ENST00000384417 107 ntBASIC1.55□□□□□ -2.16
CXXC1Q9P0U4 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
CXXC1Q9P0U4 SNORD124-201ENST00000459577 104 ntBASIC1.55□□□□□ -2.16
CXXC1Q9P0U4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 RNU6-132P-201ENST00000383863 107 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 RNA5SP292-201ENST00000390974 118 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 AL606490.4-201ENST00000423117 127 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 SNORA18.5-201ENST00000516616 101 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 AC025627.3-201ENST00000582078 182 ntBASIC1.54□□□□□ -2.16
CXXC1Q9P0U4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.30-201ENST00000362572 97 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 SNORD114-27-201ENST00000363766 70 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 RNU1-124P-201ENST00000363861 145 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 SNORD101-201ENST00000384027 73 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 RNU6-787P-201ENST00000384032 107 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 RNU6-469P-201ENST00000516253 101 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 RNA5SP404-201ENST00000517118 132 ntBASIC1.53□□□□□ -2.16
CXXC1Q9P0U4 AC002350.1-201ENST00000490759 375 ntBASIC1.52□□□□□ -2.17
CXXC1Q9P0U4 RNU6-135P-201ENST00000516769 101 ntBASIC1.52□□□□□ -2.17
CXXC1Q9P0U4 U6.100-201ENST00000636230 99 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms